FFCP PHASE1:Hg19::chr2:152146197..152146208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9111 | |EntrezGene=9111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7854 | |HGNC=7854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=168bp_to_ENST00000477072,ENST00000491771_5end | |association_with_transcript=168bp_to_ENST00000477072,ENST00000491771_5end | ||
|cluster_id=chr2:152146197..152146208,- | |||
|description=CAGE_peak_3_at_NMI_5end | |description=CAGE_peak_3_at_NMI_5end | ||
|id=chr2:152146197..152146208,- | |id=chr2:152146197..152146208,- | ||
|ontology_enrichment_celltype=CL:0000037!1.05e-17!172;CL:0000566!1.05e-17!172;CL:0000763!1.90e-17!112;CL:0000049!1.90e-17!112;CL:0002032!2.59e-17!165;CL:0000837!2.59e-17!165;CL:0000988!8.09e-17!182;CL:0000738!6.79e-10!140;CL:0002087!1.06e-09!119;CL:0002194!2.69e-09!63;CL:0000576!2.69e-09!63;CL:0000040!2.69e-09!63;CL:0000559!2.69e-09!63;CL:0000766!3.56e-09!76;CL:0002009!3.85e-09!65;CL:0000839!1.21e-08!70;CL:0002031!1.31e-08!124;CL:0000557!1.72e-07!71 | |ontology_enrichment_celltype=CL:0000037!1.05e-17!172;CL:0000566!1.05e-17!172;CL:0000763!1.90e-17!112;CL:0000049!1.90e-17!112;CL:0002032!2.59e-17!165;CL:0000837!2.59e-17!165;CL:0000988!8.09e-17!182;CL:0000738!6.79e-10!140;CL:0002087!1.06e-09!119;CL:0002194!2.69e-09!63;CL:0000576!2.69e-09!63;CL:0000040!2.69e-09!63;CL:0000559!2.69e-09!63;CL:0000766!3.56e-09!76;CL:0002009!3.85e-09!65;CL:0000839!1.21e-08!70;CL:0002031!1.31e-08!124;CL:0000557!1.72e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000763;6.35e-10;100!CL:0000039;4.59e-08;7!CL:0000586;4.59e-08;7!CL:0000988;3.87e-07;177!CL:0000576;4.28e-07;48!CL:0000473;4.93e-07;39!CL:0000234;4.93e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.72e-28,161;CL:0000837,4.72e-28,161;CL:0000037,1.57e-27,168;CL:0000763,2.50e-26,108;CL:0000049,2.50e-26,108;CL:0000988,8.24e-25,177;CL:0000738,1.20e-14,136;CL:0002087,1.04e-13,115;CL:0002031,2.90e-13,120;CL:0000766,4.80e-13,72;CL:0002009,3.75e-12,61;CL:0002194,6.84e-12,59;CL:0000576,6.84e-12,59;CL:0000040,6.84e-12,59;CL:0000559,6.84e-12,59;CL:0000839,2.65e-11,66;CL:0000473,2.73e-10,48;CL:0000234,2.73e-10,48;CL:0000557,3.19e-10,67;CL:0000134,6.16e-09,354;CL:0000039,1.23e-08,7;CL:0000586,1.23e-08,7;CL:0002320,1.28e-08,361;CL:0000860,1.53e-08,42;CL:0002057,1.53e-08,42;CL:0000219,1.73e-07,386 | |||
|ontology_enrichment_development_v019=CL:0000049;6.27e-09;108 | |||
|ontology_enrichment_disease=DOID:2531!3.23e-14!51;DOID:0060083!3.23e-14!51;DOID:1240!6.47e-14!39;DOID:8692!3.73e-12!31;DOID:162!1.12e-08!235;DOID:14566!2.17e-08!239 | |ontology_enrichment_disease=DOID:2531!3.23e-14!51;DOID:0060083!3.23e-14!51;DOID:1240!6.47e-14!39;DOID:8692!3.73e-12!31;DOID:162!1.12e-08!235;DOID:14566!2.17e-08!239 | ||
|ontology_enrichment_disease_v019=DOID:8692;2.78e-18;31!DOID:1240;2.73e-17;39!DOID:2531;1.75e-13;51!DOID:0060083;1.75e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.30e-23,51;DOID:0060083,8.30e-23,51;DOID:1240,2.77e-22,39;DOID:8692,1.82e-19,31;DOID:162,8.11e-09,235;DOID:0050686,1.45e-08,137;DOID:14566,2.97e-08,239 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.77e-10!102;UBERON:0003061!3.77e-10!102;UBERON:0002193!6.63e-09!112;UBERON:0002371!3.11e-07!80;UBERON:0002384!9.05e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!3.77e-10!102;UBERON:0003061!3.77e-10!102;UBERON:0002193!6.63e-09!112;UBERON:0002371!3.11e-07!80;UBERON:0002384!9.05e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.63e-11,98;UBERON:0003061,4.63e-11,98;UBERON:0002193,6.07e-09,108;UBERON:0002371,1.45e-08,76;UBERON:0002384,2.13e-08,371;UBERON:0001474,7.68e-08,82;UBERON:0004765,7.69e-07,90 | |||
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|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0.313454721478088,0,0,0.376627918784408,3.36218985290986,2.95562122019805,3.22714203386085,0,0,0.309632246632152,0,0,0,0.0774672005803016,0.142169232487422,0.587200878669695,1.66198622559563,1.40381113229099,0.651032612147555,0.671746422719773,0,1.03030227053675,1.01778767145695,0.755751887377619,0.970336244751265,1.85943229524548,0,1.23882548358041,4.31538588483226,0.256160706529101,1.41889337933151,2.41321976515633,0,2.70852973188684,0.188242339542605,0,0.449446968890169,2.14258724659632,0,0.639337125799041,1.9791078011203,0.199463657621632,1.70489900213078,1.7412554317715,0,3.11411124497787,1.00499466102697,0,1.08594422352558,4.23779651843358,0.736555271975129,2.84816148696796,0.845021145247767,1.06302149982522,1.25795187305026,1.01095768031846,0.600707571366025,0.64290234678832,0.285012743741249,1.39241674039363,1.46131323011707,0,1.63841583378639,0,0,0,0,0,0,0.569212969109448,1.17447437874188,0,0,0,0.790152254325231,0,0,0.205601498999509,0.668745981562712,0.32592226663359,0,0,0.222820913770347,0.294605907474837,0.221533894583621,0,0.25618263945135,0.390178042679635,0.328875809207352,0.276350017785848,0.579606171470105,0.296573126324121,0.267540828089713,0,0.566546713487831,0.383220493601921,0.34362744548263,0.253019692019503,0.318565414324097,0,0.950452044448374,0.903450714466637,0.639933055772092,1.24930726552346,1.65744076430812,1.64225599384209,0.403213486449465,0,0.144824403882799,4.87613732627923,1.34140171940727,0,0.722878304769133,0,0.144846518960824,0,0.973269740605272,0.0945348171640679,0,0.351339142772504,0.261958150995425,0,0,0,1.0447784237956,0.930705723632056,0.476981248610684,1.14398982156026,0.371457501329565,0.596287222100115,0,0.347140501607594,1.69592382577203,0.419499436209906,0,0.626984899610432,0.516833518338658,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0,1.25019619597712,0.44905874525234,1.0135033243499,0,0,0,7.9068250461638,3.87780264148325,0,0,0.25326102332916,0.264818361626438,0,1.06400514659507,0,0,0,1.55605517699883,0.67355336034844,0.163461903113459,0.302714855289863,1.72852777344,0.70296429550139,0,0,0.298897361103602,0.23486899728753,0.647491777472526,0.140450806702248,0.204154171254893,0.368502951935304,0,0,0.494533858557114,0,0,0.505008341862199,0.750711119231785,0.277064115484183,0.877955241761676,0,0.600952235626387,1.24775401476023,0.179389635688862,0.213557388818567,0.423863802319124,0,0.412210116953756,0,0,0,0.194874010322397,0.252433774244115,0.368199594569197,0.161646056818812,0,0.201504196455281,0.169560592310488,0,0,0,1.70763188581434,1.45782745153634,1.2781333715647,1.55491582523056,0.504641701751257,0,0,0.643240938192885,0,0,0.721879481669586,0.236613600079688,0,0,0.330881918197182,0.435758888184812,0.237270619111097,0,0,0.38474715694639,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.122988438543114,0.686271241194102,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0.695582429850461,0.469634776943287,0.721832238805369,0,0.570762456703795,0.790204397959275,0,0.246217006087397,3.04205544681009,1.18904929830983,0,0.335964256397719,0,0.179117045405697,0.290633938513962,0,0,0.528290604079356,0.207328115540772,0.288239906833923,0,0,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.51336800074665,0.129271715757778,0,0,0.797814349754612,0,0.257207374262142,0,0,0,0,0,0.65147236858747,0.355391948742546,0.791951872933429,0.602878754119172,1.74306691720059,0.99972991182057,1.2162378064119,0,2.10833939483032,0.239624855491583,0,1.42636905040718,0.289562613335158,0.821905290201534,0.179060963239896,1.45710687191585,0.197030760201927,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0.837581326671744,0,2.99602809578873,2.99161459204025,13.2612964299531,0.24538298343828,1.00034104211935,0,0.623912584592421,0.535286966391485,1.26161932027148,0.35142424497814,0,0,0,0.664225598535437,1.10621501125022,0.60818530127658,0.587403472388222,0.686286847621712,1.24060815673732,0.647142602455851,0.533637789017222,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.804269605718038,1.48418066444991,0.462629081407967,0.710246901252508,0.492762936082855,0.519254429183621,0.581051892299796,0.362578348774867,0,0.0920809889358963,0.68888668898764,0.910455840033585,1.70461739447251,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0.270946437543853,0.501689773854853,0,0,0.223874754722178,1.75407901316748,1.0457418040996,0,0,0.325378394664303,1.03041011647722,0.0915694648183434,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0.616194468458578,0.921022048356777,0.275673144969061,0.537101224341368,0.580066775656914,0.0852266274161009,0.534192213880424,0,0,0.127612712494584,0.10115778085555,0.464845549297286,0,0,0.616067160352178,0,0.869932992075073,0,0.429374660225974,1.48863347743867,0.316379424718726,1.71567174531442,0,1.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| ||
|short_description=p3@NMI | |short_description=p3@NMI | ||
}} | }} |
Latest revision as of 11:30, 17 September 2015
Short description: | p3@NMI |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NMI_5end |
Coexpression cluster: | NA |
Association with transcript: | 168bp_to_ENST00000477072, ENST00000491771_5end |
EntrezGene: | NMI |
HGNC: | 7854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.72e-28 | 161 |
hematopoietic multipotent progenitor cell | 4.72e-28 | 161 |
hematopoietic stem cell | 1.57e-27 | 168 |
myeloid cell | 2.50e-26 | 108 |
common myeloid progenitor | 2.50e-26 | 108 |
hematopoietic cell | 8.24e-25 | 177 |
leukocyte | 1.20e-14 | 136 |
nongranular leukocyte | 1.04e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 2.90e-13 | 120 |
myeloid leukocyte | 4.80e-13 | 72 |
macrophage dendritic cell progenitor | 3.75e-12 | 61 |
monopoietic cell | 6.84e-12 | 59 |
monocyte | 6.84e-12 | 59 |
monoblast | 6.84e-12 | 59 |
promonocyte | 6.84e-12 | 59 |
myeloid lineage restricted progenitor cell | 2.65e-11 | 66 |
defensive cell | 2.73e-10 | 48 |
phagocyte | 2.73e-10 | 48 |
granulocyte monocyte progenitor cell | 3.19e-10 | 67 |
mesenchymal cell | 6.16e-09 | 354 |
germ line cell | 1.23e-08 | 7 |
germ cell | 1.23e-08 | 7 |
connective tissue cell | 1.28e-08 | 361 |
classical monocyte | 1.53e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.53e-08 | 42 |
motile cell | 1.73e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.63e-11 | 98 |
blood island | 4.63e-11 | 98 |
hemolymphoid system | 6.07e-09 | 108 |
bone marrow | 1.45e-08 | 76 |
connective tissue | 2.13e-08 | 371 |
bone element | 7.68e-08 | 82 |
skeletal element | 7.69e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.30e-23 | 51 |
immune system cancer | 8.30e-23 | 51 |
leukemia | 2.77e-22 | 39 |
myeloid leukemia | 1.82e-19 | 31 |
cancer | 8.11e-09 | 235 |
organ system cancer | 1.45e-08 | 137 |
disease of cellular proliferation | 2.97e-08 | 239 |