FFCP PHASE1:Hg19::chr13:45914869..45914925,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7178 | |EntrezGene=7178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12022 | |HGNC=12022 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_uc010tfq.1_5end | |association_with_transcript=23bp_to_uc010tfq.1_5end | ||
|cluster_id=chr13:45914869..45914925,- | |||
|description=CAGE_peak_3_at_TPT1_5end | |description=CAGE_peak_3_at_TPT1_5end | ||
|id=chr13:45914869..45914925,- | |id=chr13:45914869..45914925,- | ||
|ontology_enrichment_celltype=CL:0002057!3.21e-19!42;CL:0000860!2.40e-16!45;CL:0002087!1.03e-12!119;CL:0002009!8.98e-12!65;CL:0002194!1.36e-11!63;CL:0000576!1.36e-11!63;CL:0000040!1.36e-11!63;CL:0000559!1.36e-11!63;CL:0002031!2.64e-11!124;CL:0000738!3.10e-10!140;CL:0000557!1.29e-09!71;CL:0000839!2.35e-09!70;CL:0000766!3.36e-09!76;CL:0000037!1.06e-08!172;CL:0000566!1.06e-08!172;CL:0002032!1.90e-08!165;CL:0000837!1.90e-08!165;CL:0000988!1.81e-07!182 | |ontology_enrichment_celltype=CL:0002057!3.21e-19!42;CL:0000860!2.40e-16!45;CL:0002087!1.03e-12!119;CL:0002009!8.98e-12!65;CL:0002194!1.36e-11!63;CL:0000576!1.36e-11!63;CL:0000040!1.36e-11!63;CL:0000559!1.36e-11!63;CL:0002031!2.64e-11!124;CL:0000738!3.10e-10!140;CL:0000557!1.29e-09!71;CL:0000839!2.35e-09!70;CL:0000766!3.36e-09!76;CL:0000037!1.06e-08!172;CL:0000566!1.06e-08!172;CL:0002032!1.90e-08!165;CL:0000837!1.90e-08!165;CL:0000988!1.81e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-18;33!CL:0002057;2.37e-18;33!CL:0000473;5.32e-14;39!CL:0000234;5.32e-14;39!CL:0000576;1.20e-10;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.20e-19,42;CL:0002057,3.20e-19,42;CL:0000473,2.53e-18,48;CL:0000234,2.53e-18,48;CL:0002087,9.02e-14,115;CL:0002009,2.54e-13,61;CL:0002194,3.69e-13,59;CL:0000576,3.69e-13,59;CL:0000040,3.69e-13,59;CL:0000559,3.69e-13,59;CL:0002031,3.12e-12,120;CL:0000738,4.96e-11,136;CL:0000557,7.80e-11,67;CL:0000839,1.47e-10,66;CL:0000766,2.55e-10,72;CL:0000037,2.67e-09,168;CL:0002032,4.76e-09,161;CL:0000837,4.76e-09,161;CL:0000988,6.34e-08,177;CL:0000763,5.28e-07,108;CL:0000049,5.28e-07,108;CL:0002320,5.93e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.28e-14;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.22e-10!102;UBERON:0003061!5.22e-10!102;UBERON:0002193!2.94e-09!112;UBERON:0002371!8.76e-09!80;UBERON:0001474!3.55e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!5.22e-10!102;UBERON:0003061!5.22e-10!102;UBERON:0002193!2.94e-09!112;UBERON:0002371!8.76e-09!80;UBERON:0001474!3.55e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.60e-11,98;UBERON:0003061,5.60e-11,98;UBERON:0002193,4.08e-10,108;UBERON:0002371,7.97e-10,76;UBERON:0004765,4.50e-08,90;UBERON:0001474,5.05e-08,82;UBERON:0000926,7.60e-08,315;UBERON:0004120,7.60e-08,315;UBERON:0006603,7.60e-08,315;UBERON:0002405,8.89e-08,93;UBERON:0001434,1.31e-07,100 | |||
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| ||
|short_description=p3@TPT1 | |short_description=p3@TPT1 | ||
}} | }} |
Latest revision as of 12:03, 17 September 2015
Short description: | p3@TPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_uc010tfq.1_5end |
EntrezGene: | TPT1 |
HGNC: | 12022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.20e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.20e-19 | 42 |
defensive cell | 2.53e-18 | 48 |
phagocyte | 2.53e-18 | 48 |
nongranular leukocyte | 9.02e-14 | 115 |
macrophage dendritic cell progenitor | 2.54e-13 | 61 |
monopoietic cell | 3.69e-13 | 59 |
monocyte | 3.69e-13 | 59 |
monoblast | 3.69e-13 | 59 |
promonocyte | 3.69e-13 | 59 |
hematopoietic lineage restricted progenitor cell | 3.12e-12 | 120 |
leukocyte | 4.96e-11 | 136 |
granulocyte monocyte progenitor cell | 7.80e-11 | 67 |
myeloid lineage restricted progenitor cell | 1.47e-10 | 66 |
myeloid leukocyte | 2.55e-10 | 72 |
hematopoietic stem cell | 2.67e-09 | 168 |
hematopoietic oligopotent progenitor cell | 4.76e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.76e-09 | 161 |
hematopoietic cell | 6.34e-08 | 177 |
myeloid cell | 5.28e-07 | 108 |
common myeloid progenitor | 5.28e-07 | 108 |
connective tissue cell | 5.93e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.60e-11 | 98 |
blood island | 5.60e-11 | 98 |
hemolymphoid system | 4.08e-10 | 108 |
bone marrow | 7.97e-10 | 76 |
skeletal element | 4.50e-08 | 90 |
bone element | 5.05e-08 | 82 |
mesoderm | 7.60e-08 | 315 |
mesoderm-derived structure | 7.60e-08 | 315 |
presumptive mesoderm | 7.60e-08 | 315 |
immune system | 8.89e-08 | 93 |
skeletal system | 1.31e-07 | 100 |