FFCP PHASE1:Hg19::chr1:155271213..155271234,-: Difference between revisions
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|id=chr1:155271213..155271234,-
|short_description=p2@PKLR
|description=CAGE_peak_2_at_PKLR_5end
|association_with_transcript=0bp_to_ENST00000342741,ENST00000423816...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5313 | |EntrezGene=5313 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9020 | |HGNC=9020 | ||
|TSSclassifier=strong | |||
|UniProt=P30613,E7ESY9 | |UniProt=P30613,E7ESY9 | ||
|association_with_transcript=0bp_to_ENST00000342741,ENST00000423816,NM_000298,uc001fkb.3_5end | |||
|cluster_id=chr1:155271213..155271234,- | |||
|coexpression_cluster_id=C93 | |||
|description=CAGE_peak_2_at_PKLR_5end | |||
|id=chr1:155271213..155271234,- | |||
|ontology_enrichment_celltype=CL:0000764!7.44e-13!2;CL:0000765!7.44e-13!2;CL:0000050!7.44e-13!2;CL:0000038!7.44e-13!2;CL:0000558!7.44e-13!2;CL:0000547!7.44e-13!2;CL:0000549!7.44e-13!2;CL:0000550!7.44e-13!2;CL:0000552!7.44e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.15e-24;2!CL:0000558;1.15e-24;2!CL:0000763;1.14e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.15e-24,2;CL:0000765,1.15e-24,2;CL:0000050,1.15e-24,2;CL:0000038,1.15e-24,2;CL:0000558,1.15e-24,2;CL:0000547,1.15e-24,2;CL:0000549,1.15e-24,2;CL:0000550,1.15e-24,2;CL:0000552,1.15e-24,2;CL:0000763,1.60e-16,108;CL:0000049,1.60e-16,108;CL:0002032,1.53e-10,161;CL:0000837,1.53e-10,161;CL:0000037,4.98e-10,168;CL:0000988,1.98e-09,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.21e-26!8;DOID:8692!9.87e-21!31;DOID:1240!4.91e-16!39;DOID:2531!9.34e-12!51;DOID:0060083!9.34e-12!51;DOID:8552!2.50e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1036;6.37e-53;8!DOID:8692;2.05e-43;31!DOID:1240;3.98e-27;39!DOID:2531;1.76e-17;51!DOID:0060083;1.76e-17;51!DOID:8552;2.32e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.37e-53,8;DOID:8692,2.90e-44,31;DOID:1240,6.27e-35,39;DOID:2531,2.10e-26,51;DOID:0060083,2.10e-26,51;DOID:8552,2.32e-13,1;DOID:0050686,7.48e-09,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@PKLR | |||
}} | }} |
Latest revision as of 12:21, 17 September 2015
Short description: | p2@PKLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PKLR_5end |
Coexpression cluster: | C93_chronic_acute_leukemia_acantholytic_medulloblastoma_testis_papillotubular |
Association with transcript: | 0bp_to_ENST00000342741, ENST00000423816, NM_000298, uc001fkb.3_5end |
EntrezGene: | PKLR |
HGNC: | 9020 |
UniProt: | P30613E7ESY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.15e-24 | 2 |
erythroblast | 1.15e-24 | 2 |
megakaryocyte-erythroid progenitor cell | 1.15e-24 | 2 |
erythroid progenitor cell | 1.15e-24 | 2 |
reticulocyte | 1.15e-24 | 2 |
proerythroblast | 1.15e-24 | 2 |
basophilic erythroblast | 1.15e-24 | 2 |
polychromatophilic erythroblast | 1.15e-24 | 2 |
orthochromatic erythroblast | 1.15e-24 | 2 |
myeloid cell | 1.60e-16 | 108 |
common myeloid progenitor | 1.60e-16 | 108 |
hematopoietic oligopotent progenitor cell | 1.53e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-10 | 161 |
hematopoietic stem cell | 4.98e-10 | 168 |
hematopoietic cell | 1.98e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.37e-53 | 8 |
myeloid leukemia | 2.90e-44 | 31 |
leukemia | 6.27e-35 | 39 |
hematologic cancer | 2.10e-26 | 51 |
immune system cancer | 2.10e-26 | 51 |
chronic myeloid leukemia | 2.32e-13 | 1 |
organ system cancer | 7.48e-09 | 137 |