FFCP PHASE1:Hg19::chr11:2923940..2923964,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2923940..2923964,+ to FFCP PHASE1:Hg19::chr11:2923940..2923964,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5002 | |EntrezGene=5002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10964 | |HGNC=10964 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BI1 | |UniProt=Q96BI1 | ||
|association_with_transcript=290bp_to_ENST00000380574_5end | |||
|cluster_id=chr11:2923940..2923964,+ | |||
|description=CAGE_peak_5_at_SLC22A18_5end | |||
|id=chr11:2923940..2923964,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.83e-26!76;CL:0000860!6.07e-25!45;CL:0002057!1.82e-24!42;CL:0000557!5.40e-22!71;CL:0002194!1.88e-21!63;CL:0000576!1.88e-21!63;CL:0000040!1.88e-21!63;CL:0000559!1.88e-21!63;CL:0000839!1.97e-21!70;CL:0002009!2.25e-21!65;CL:0000763!3.06e-14!112;CL:0000049!3.06e-14!112;CL:0000738!4.63e-10!140;CL:0002393!7.89e-09!9;CL:0002397!7.89e-09!9;CL:0002031!8.70e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000766;1.66e-14;69!CL:0000576;1.49e-13;48!CL:0000094;7.57e-13;8!CL:0000081;4.33e-12;11!CL:0000860;1.78e-11;33!CL:0002057;1.78e-11;33!CL:0002393;3.53e-11;6!CL:0002397;3.53e-11;6!CL:0000875;8.56e-10;3!CL:0002396;8.56e-10;3!CL:0000767;1.70e-09;3!CL:0000473;1.66e-08;39!CL:0000234;1.66e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.94e-28,72;CL:0000860,6.18e-26,42;CL:0002057,6.18e-26,42;CL:0000473,2.38e-24,48;CL:0000234,2.38e-24,48;CL:0002194,4.53e-20,59;CL:0000576,4.53e-20,59;CL:0000040,4.53e-20,59;CL:0000559,4.53e-20,59;CL:0002393,2.24e-19,9;CL:0002397,2.24e-19,9;CL:0002009,3.26e-19,61;CL:0000839,6.99e-19,66;CL:0000557,1.66e-18,67;CL:0000763,1.37e-17,108;CL:0000049,1.37e-17,108;CL:0000094,3.85e-13,8;CL:0000738,2.69e-12,136;CL:0000081,3.06e-12,11;CL:0000875,8.69e-10,3;CL:0000767,8.69e-10,3;CL:0002396,8.69e-10,3;CL:0002032,3.50e-09,161;CL:0000837,3.50e-09,161;CL:0000037,1.74e-08,168;CL:0000988,2.32e-08,177;CL:0002031,1.15e-07,120;CL:0002087,1.81e-07,115;CL:0000575,6.44e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.21e-18!80;UBERON:0001474!4.90e-18!86;UBERON:0004765!2.76e-16!101;UBERON:0001434!2.76e-16!101;UBERON:0002390!8.21e-15!102;UBERON:0003061!8.21e-15!102;UBERON:0002193!6.03e-14!112;UBERON:0002405!7.81e-13!115;UBERON:0002204!1.96e-11!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.44e-15,76;UBERON:0002405,4.28e-14,93;UBERON:0001474,5.70e-14,82;UBERON:0002193,2.90e-12,108;UBERON:0004765,3.52e-12,90;UBERON:0002390,9.21e-12,98;UBERON:0003061,9.21e-12,98;UBERON:0001434,2.34e-10,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,3.14691421479123,1.91914699048606,3.2511385896376,0,0,0.739508020333575,0,0,0,0.553995408531877,1.40381113229099,1.51907609501096,0.447830948479849,0,0.257575567634187,0.726991193897824,1.13362783106643,0.727752183563449,0.697287110717054,0.822335776043652,1.23882548358041,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0.645484683583826,0,0.941211697713023,1.09162460023138,1.12361742222542,1.22433556948361,0.641858054152187,1.91801137739712,0.659702600373432,0,0,1.45104619314292,5.6738522469114,1.86846674698672,0.75374599577023,2.08593167368081,0.434377689410233,1.21079900526674,5.15588690382591,1.26584954976354,1.47878700418359,1.91343869968539,2.09658645508376,0.673971786878971,1.05123824989054,0.803627933485401,2.28010194992999,3.58050018958362,2.19196984517561,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,0.982343066232845,2.91436230634034,1.85392221392215,0.324547393654683,0.174129737299267,1.46253756570752,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0.872188104285069,0.993943903390637,0,0.926864265692532,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,2.15585442544872,0,0,0,0.438977620880838,0.30648779579902,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0.337552664482532,0.194874010322397,0.252433774244115,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.245976877086227,0,0.439001141634502,4.49607013030478,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0.806026704325635,0.581267877027924,0,0,0.176096868026452,0.621984346622316,1.00883967391873,0.6312121671319,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,1.80863626235752,0.871533458600294,0.799783929456456,2.43247561282381,0,0,0.479249710983165,1.14861935834114,0,0.434343920002738,0.61642896765115,0,0,0.197030760201927,0,0,0,0,0,0,0,1.49801404789436,0,4.97298616123243,0,0,0.271265023699736,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,1.03473071292505,0,0,0.0868836144680828,0.979005787313703,0,0.206768026122887,0,0.853820462427555,0.303127571446259,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0.0821271560138091,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,2.02578175658972,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.103041011647722,0.27470839445503,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.322260734604821,0,0,0.178064071293475,0.165284915360978,0,0.382838137483752,0.4046311234222,0,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0,1.58510321173008,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0.141405431953713,0,0.551365343546124,0,0,1.15755106853338,0,0,0,0,0,0.0982490410131212,0,0,0.633322905892992,0.329294892959902,0,0,0.192444225451024,0,0,0.188287601553558,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0.238231775457789,1.23408681925858,0,0.540031437238115,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0.102268682502155,0,0,0,0.895105873378046,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0.349839999984783,0,2.16207551742449,1.01701460117107,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,8.95735737970654,1.68069372556344,2.4441205797345,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,1.20990716048664,0,1.13735843331278,0,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0.783939179315021,0,0.698906672968121,0,0.19351266257817,0.146178634172371,0.246346371159628,1.06687918137261,0,0.225980740780532,0,0,0.189932387867636,0,0.881747022766871,1.70762395791482,0.19980960958213,0.576361668616424,0,0,0.288109595976299,0.372757606696298,1.88555227693436,0.407712618220842,0.418411385249333,0.305994652908965,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0.77380195455795,0.0607495566580247,1.0063040627978,1.18208560948797,0.314727528809989,0,0.537862017998534,0,0,0,0,1.62899880526114,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0.302461847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| ||
|short_description=p5@SLC22A18 | |||
}} | }} |
Latest revision as of 13:15, 17 September 2015
Short description: | p5@SLC22A18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC22A18_5end |
Coexpression cluster: | NA |
Association with transcript: | 290bp_to_ENST00000380574_5end |
EntrezGene: | SLC22A18 |
HGNC: | 10964 |
UniProt: | Q96BI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.94e-28 | 72 |
classical monocyte | 6.18e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.18e-26 | 42 |
defensive cell | 2.38e-24 | 48 |
phagocyte | 2.38e-24 | 48 |
monopoietic cell | 4.53e-20 | 59 |
monocyte | 4.53e-20 | 59 |
monoblast | 4.53e-20 | 59 |
promonocyte | 4.53e-20 | 59 |
intermediate monocyte | 2.24e-19 | 9 |
CD14-positive, CD16-positive monocyte | 2.24e-19 | 9 |
macrophage dendritic cell progenitor | 3.26e-19 | 61 |
myeloid lineage restricted progenitor cell | 6.99e-19 | 66 |
granulocyte monocyte progenitor cell | 1.66e-18 | 67 |
myeloid cell | 1.37e-17 | 108 |
common myeloid progenitor | 1.37e-17 | 108 |
granulocyte | 3.85e-13 | 8 |
leukocyte | 2.69e-12 | 136 |
blood cell | 3.06e-12 | 11 |
non-classical monocyte | 8.69e-10 | 3 |
basophil | 8.69e-10 | 3 |
CD14-low, CD16-positive monocyte | 8.69e-10 | 3 |
hematopoietic oligopotent progenitor cell | 3.50e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.50e-09 | 161 |
hematopoietic stem cell | 1.74e-08 | 168 |
hematopoietic cell | 2.32e-08 | 177 |
hematopoietic lineage restricted progenitor cell | 1.15e-07 | 120 |
nongranular leukocyte | 1.81e-07 | 115 |
corneal epithelial cell | 6.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.44e-15 | 76 |
immune system | 4.28e-14 | 93 |
bone element | 5.70e-14 | 82 |
hemolymphoid system | 2.90e-12 | 108 |
skeletal element | 3.52e-12 | 90 |
hematopoietic system | 9.21e-12 | 98 |
blood island | 9.21e-12 | 98 |
skeletal system | 2.34e-10 | 100 |