FFCP PHASE1:Hg19::chr17:73900954..73901003,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64978 | |EntrezGene=64978 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14033 | |HGNC=14033 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461602,ENST00000464758_5end | |association_with_transcript=0bp_to_ENST00000461602,ENST00000464758_5end | ||
|cluster_id=chr17:73900954..73901003,- | |||
|coexpression_cluster_id=C2145 | |||
|description=CAGE_peak_1_at_MRPL38_5end | |description=CAGE_peak_1_at_MRPL38_5end | ||
|id=chr17:73900954..73901003,- | |id=chr17:73900954..73901003,- | ||
|ontology_enrichment_celltype=CL:0000066!4.95e-28!254;CL:0002321!7.61e-10!248;CL:0000220!8.48e-10!246;CL:0000223!2.03e-07!59;CL:1000449!2.70e-07!16;CL:1000497!7.80e-07!18;CL:0002518!7.80e-07!18 | |ontology_enrichment_celltype=CL:0000066!4.95e-28!254;CL:0002321!7.61e-10!248;CL:0000220!8.48e-10!246;CL:0000223!2.03e-07!59;CL:1000449!2.70e-07!16;CL:1000497!7.80e-07!18;CL:0002518!7.80e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.87e-08;15!CL:1000497;8.04e-08;17!CL:0002518;8.04e-08;17!CL:0002681;2.47e-07;12!CL:0002584;2.47e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.63e-28,253;CL:0002321,9.04e-10,250;CL:1000449,2.13e-08,15;CL:1000497,8.54e-08,17;CL:0002518,8.54e-08,17;CL:0000223,1.03e-07,58;CL:0002681,2.69e-07,12;CL:0002584,2.69e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.16e-19!235;DOID:14566!6.07e-18!239;DOID:0050687!4.36e-17!143;DOID:305!6.41e-16!106 | |ontology_enrichment_disease=DOID:162!2.16e-19!235;DOID:14566!6.07e-18!239;DOID:0050687!4.36e-17!143;DOID:305!6.41e-16!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.16e-19,235;DOID:14566,6.07e-18,239;DOID:0050687,4.36e-17,143;DOID:305,6.41e-16,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!3.52e-13!238;UBERON:0009142!3.52e-13!238;UBERON:0005177!2.28e-12!107;UBERON:0001041!3.45e-12!98;UBERON:0000077!7.78e-11!130;UBERON:0000072!1.23e-09!46;UBERON:0005172!1.58e-09!55;UBERON:0005173!1.58e-09!55;UBERON:0009569!1.84e-09!113;UBERON:0004119!2.53e-09!169;UBERON:0000925!2.53e-09!169;UBERON:0006595!2.53e-09!169;UBERON:0000481!2.69e-09!347;UBERON:0001048!3.27e-09!168;UBERON:0004921!4.63e-09!129;UBERON:0004185!4.63e-09!129;UBERON:0001007!3.30e-08!155;UBERON:0001555!3.30e-08!155;UBERON:0007026!3.30e-08!155;UBERON:0002113!1.63e-07!27;UBERON:0003918!1.63e-07!27;UBERON:0005095!1.63e-07!27;UBERON:0007687!1.63e-07!27;UBERON:0008947!1.88e-07!38;UBERON:0003258!1.88e-07!38;UBERON:0004211!2.70e-07!16;UBERON:0001285!2.70e-07!16;UBERON:0007684!2.70e-07!16;UBERON:0003220!2.70e-07!16;UBERON:0004208!2.70e-07!16;UBERON:0000065!3.24e-07!53;UBERON:0000063!3.78e-07!97;UBERON:0002100!3.81e-07!216;UBERON:0002417!5.01e-07!61;UBERON:0000916!5.01e-07!61;UBERON:0003914!5.65e-07!118;UBERON:0000490!6.32e-07!138;UBERON:0000466!7.25e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;8.43e-10;24!UBERON:0011143;8.43e-10;24!UBERON:0006554;3.09e-09;30!UBERON:0001008;3.09e-09;30!UBERON:0006555;1.87e-08;15!UBERON:0004819;1.87e-08;15!UBERON:0001285;1.87e-08;15!UBERON:0007684;1.87e-08;15!UBERON:0000072;7.42e-08;37!UBERON:0005172;1.59e-07;52!UBERON:0005173;1.59e-07;52!UBERON:0000353;2.10e-07;15!UBERON:0001225;2.47e-07;12!UBERON:0008987;2.47e-07;12!UBERON:0000489;4.94e-07;29!UBERON:0000490;5.77e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,2.43e-14,101;UBERON:0001041,7.97e-12,87;UBERON:0005172,4.14e-10,54;UBERON:0005173,4.14e-10,54;UBERON:0009569,1.08e-09,112;UBERON:0000072,5.13e-09,47;UBERON:0002100,7.65e-09,199;UBERON:0004921,1.59e-08,118;UBERON:0004211,2.13e-08,15;UBERON:0009773,2.13e-08,15;UBERON:0001231,2.13e-08,15;UBERON:0001285,2.13e-08,15;UBERON:0007684,2.13e-08,15;UBERON:0004208,2.13e-08,15;UBERON:0002113,2.71e-08,26;UBERON:0003918,2.71e-08,26;UBERON:0011143,2.71e-08,26;UBERON:0005095,2.71e-08,26;UBERON:0007687,2.71e-08,26;UBERON:0004119,2.89e-08,160;UBERON:0000925,2.89e-08,160;UBERON:0006595,2.89e-08,160;UBERON:0001048,4.69e-08,160;UBERON:0001007,1.81e-07,145;UBERON:0001555,1.81e-07,145;UBERON:0007026,1.81e-07,145;UBERON:0002417,1.82e-07,60;UBERON:0000916,1.82e-07,60;UBERON:0006554,1.86e-07,47;UBERON:0008947,1.88e-07,38;UBERON:0003258,1.88e-07,38;UBERON:0000353,2.23e-07,15;UBERON:0006555,2.47e-07,16;UBERON:0004819,2.47e-07,16;UBERON:0000490,2.53e-07,148;UBERON:0001225,2.69e-07,12;UBERON:0008987,2.69e-07,12;UBERON:0003914,2.84e-07,117;UBERON:0001008,4.61e-07,48;UBERON:0000065,9.32e-07,54 | |||
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| ||
|short_description=p1@MRPL38 | |short_description=p1@MRPL38 | ||
}} | }} |
Latest revision as of 13:22, 17 September 2015
Short description: | p1@MRPL38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL38_5end |
Coexpression cluster: | C2145_Mesenchymal_Alveolar_Renal_Placental_nonsmall_Bronchial_left |
Association with transcript: | 0bp_to_ENST00000461602, ENST00000464758_5end |
EntrezGene: | MRPL38 |
HGNC: | 14033 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.63e-28 | 253 |
embryonic cell | 9.04e-10 | 250 |
epithelial cell of nephron | 2.13e-08 | 15 |
kidney cell | 8.54e-08 | 17 |
kidney epithelial cell | 8.54e-08 | 17 |
endodermal cell | 1.03e-07 | 58 |
kidney cortical cell | 2.69e-07 | 12 |
renal cortical epithelial cell | 2.69e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.16e-19 | 235 |
disease of cellular proliferation | 6.07e-18 | 239 |
cell type cancer | 4.36e-17 | 143 |
carcinoma | 6.41e-16 | 106 |