Personal tools

FFCP PHASE1:Hg19::chr17:74236712..74236725,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=114804
|EntrezGene=114804
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=29402
|HGNC=29402
|TSSclassifier=strong
|UniProt=Q96PX1,E9PHU5
|UniProt=Q96PX1,E9PHU5
|association_with_transcript=-322bp_to_ENST00000269391,ENST00000301610,ENST00000319945,NM_052916,uc002jqz.2,uc002jra.2_5end
|association_with_transcript=-322bp_to_ENST00000269391,ENST00000301610,ENST00000319945,NM_052916,uc002jqz.2,uc002jra.2_5end
|cluster_id=chr17:74236712..74236725,-
|description=CAGE_peak_4_at_RNF157_5end
|description=CAGE_peak_4_at_RNF157_5end
|id=chr17:74236712..74236725,-
|id=chr17:74236712..74236725,-
|ontology_enrichment_celltype=CL:0000084;5.94e-29;25!CL:0000791;1.14e-21;18!CL:0000789;1.14e-21;18!CL:0002419;1.14e-21;18!CL:0000625;4.47e-11;11!CL:0000624;1.79e-09;6!CL:0000542;2.79e-08;53
|ontology_enrichment_celltype=CL:0000084!3.64e-16!25;CL:0000827!3.64e-16!25;CL:0000791!8.04e-16!18;CL:0000789!8.04e-16!18;CL:0002420!8.04e-16!18;CL:0002419!8.04e-16!18;CL:0000790!8.04e-16!18;CL:0000625!2.75e-10!11;CL:0000542!1.51e-08!53;CL:0000051!1.51e-08!53;CL:0000838!2.90e-08!52
|ontology_enrichment_development=CL:0000790;1.14e-21;18!CL:0002425;1.66e-08;2!CL:0000051;2.79e-08;53
|ontology_enrichment_celltype_v019=CL:0000084;5.94e-29;25!CL:0000791;1.14e-21;18!CL:0000789;1.14e-21;18!CL:0002419;1.14e-21;18!CL:0000625;4.47e-11;11!CL:0000624;1.79e-09;6!CL:0000542;2.79e-08;53
|ontology_enrichment_celltype_v019_2=CL:0000084,1.86e-29,25;CL:0000827,1.86e-29,25;CL:0000791,3.55e-22,18;CL:0000789,3.55e-22,18;CL:0002420,3.55e-22,18;CL:0002419,3.55e-22,18;CL:0000790,3.55e-22,18;CL:0000838,4.46e-16,52;CL:0000542,1.08e-15,53;CL:0000051,1.08e-15,53;CL:0000625,2.97e-11,11;CL:0000624,8.28e-10,6;CL:0000893,1.24e-08,2;CL:0002489,1.24e-08,2;CL:0000809,1.24e-08,2;CL:0000808,1.24e-08,2;CL:0000894,1.24e-08,2;CL:0000806,1.24e-08,2;CL:0000807,1.24e-08,2;CL:0000805,1.24e-08,2;CL:0002425,1.24e-08,2
|ontology_enrichment_development_v019=CL:0000790;1.14e-21;18!CL:0002425;1.66e-08;2!CL:0000051;2.79e-08;53
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000178;1.84e-14;15!UBERON:0000179;1.84e-14;15!UBERON:0000463;1.84e-14;15!UBERON:0002390;3.41e-09;32
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007023!1.22e-15!115;UBERON:0001049!2.61e-10!57;UBERON:0005068!2.61e-10!57;UBERON:0006241!2.61e-10!57;UBERON:0007135!2.61e-10!57;UBERON:0000955!4.84e-10!69;UBERON:0006238!4.84e-10!69;UBERON:0000178!5.17e-10!15;UBERON:0000179!5.17e-10!15;UBERON:0000463!5.17e-10!15;UBERON:0000153!8.72e-10!129;UBERON:0007811!8.72e-10!129;UBERON:0000073!9.05e-10!94;UBERON:0001016!9.05e-10!94;UBERON:0005743!6.78e-09!86;UBERON:0002616!8.02e-09!59;UBERON:0001017!1.00e-08!82;UBERON:0002346!4.29e-08!90;UBERON:0003075!4.49e-08!86;UBERON:0007284!4.49e-08!86;UBERON:0000033!5.65e-08!123;UBERON:0003080!3.13e-07!42;UBERON:0002020!9.40e-07!34;UBERON:0003528!9.40e-07!34;UBERON:0002780!9.83e-07!41;UBERON:0001890!9.83e-07!41;UBERON:0006240!9.83e-07!41
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-14;15!UBERON:0000179;1.84e-14;15!UBERON:0000463;1.84e-14;15!UBERON:0002390;3.41e-09;32
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.00e-14,15;UBERON:0000179,1.00e-14,15;UBERON:0000463,1.00e-14,15
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7703879310245,1.17903228824749,1.85041349099558,0,0.32592226663359,0.473447805734733,0,2.1167986808183,0.294605907474837,0.443067789167242,0.812411591295047,3.33037431286755,3.12142434143708,6.41307827954337,5.80335037350282,2.60822777161547,1.77943875794473,2.40786745280742,0,5.89208582027344,1.53288197440768,0.68725489096526,1.26509846009751,4.14135038621326,0.651083453856419,0.950452044448374,1.6563263098555,1.66382594500744,1.24930726552346,1.4206635122641,0.821127996921047,0.604820229674197,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0.280901613404497,0.61246251376468,0.122834317311768,1.23990937410919,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.381988425558278,1.17217447210047,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1051955513009,0.788123040807709,0,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.82707210449155,0.431428401637234,0.640365346820666,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.604297247958111,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.640986253728404,1.23764249880882,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,1.94541993357815,1.62009431171434,1.58625035258854,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0.37428108081644,0.293016358543788,0,2.22886768554957,0.568272293612826,0,0,0,0,0.703347082052564,0,2.14245036494787,0,0,0,0,0,1.23084805461069,0,0,0,0,0,2.3948309234694,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0.254253650292766,0,1.03423011972439,0,0,0,0.241192877250816,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0.922255617552241,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0.784250137270958,0.335643173951685,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0.995261931078505,1.32686346755009,0.611030144933625,9.19215498909928,3.58335422944858,3.9680340812073,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.253243183823515,0,0.0801588202515337,0,0,0.432271251462318,0,1.71594997861965,0,0,0,0.135904206073614,0,0.305994652908965,0.288950589901519,0,0.273810757783986,0,0,6.57218385698286,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0.590564889088493,0.846733320657845,0,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0,0.394028536495991,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.566560457600628,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,4.54506753365272,0,0,1.08803560673895,1.0027595760908,1.53172788381731,0.655745261419609,0.157054096250234,0.886068179966986,0.244052529803926,0.250381861413,1.14681839138014,0.221858103073705,0.372578417648301,0.276697269872462,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0.491545817507439,0,1.39991177098451,0,1.72214979660816,0,1.10463570151104,0,0,0.255788742607303,0.539124056983409,0,0.873677105536111,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.414943514785307,0.484426936895553,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0.127762427639595,0,0.672567444437648,0,0.227662191351298,0.177404740325278,0.345701962667338,0.342976018874837,0.339848664884159,0.657727735628491,0.118193840883968,0.222462803784138,0.078493092850514,0.157115589916002,0,0,0,0,0.428859265059938,0.316027223465453,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0.22910686854405,0,0,1.11855431797792,0,0,0,1.12929087541872,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0.109940516745429,0.452888530700021,1.69783147837478,1.09279780251979,0,0,0,0,0,0.4226557275834,0,0,0,0.599646935549574,0,0,0,0,0,0.286679166302903,0.473314686579554,0.271965960763659,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0.378893491091197,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0.193766729508018,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0.684466602170562,0.202056159043763,0.0717222053926763,0.332660356546013,0,0.426909383510862,0,0.269475606319761,0,0,0,0,1.00636896795513,0
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0.522371256399677,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0,0.136874425072884,0.125542639594803,0.0764134057479513,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7703879310245,1.17903228824749,1.85041349099558,0,0.32592226663359,0.473447805734733,0,2.1167986808183,0.294605907474837,0.443067789167242,0.812411591295047,3.33037431286755,3.12142434143708,6.41307827954337,5.80335037350282,2.60822777161547,1.77943875794473,2.40786745280742,0,5.89208582027344,1.53288197440768,0.68725489096526,1.26509846009751,4.14135038621326,0.651083453856419,0.950452044448374,1.6563263098555,1.66382594500744,1.24930726552346,1.4206635122641,0.821127996921047,0.604820229674197,0.267440195783507,1.30341963494519,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.23486899728753,0,0.280901613404497,0.61246251376468,0.122834317311768,1.23990937410919,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,1.44331342025273,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.381988425558278,1.17217447210047,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1051955513009,0.788123040807709,0,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.82707210449155,0.431428401637234,0.640365346820666,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0.604297247958111,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.640986253728404,1.23764249880882,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,1.19115887728894,0.411362273086194,1.94541993357815,1.62009431171434,1.58625035258854,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.99921590399346,0,0.37428108081644,0.293016358543788,0,2.22886768554957,0.568272293612826,0,0,0,0,0.703347082052564,0,2.14245036494787,0,0,0,0,0,1.23084805461069,0,0,0,0,0,2.3948309234694,1.11136990144637,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0.254253650292766,0,1.03423011972439,0,0,0,0.241192877250816,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0.922255617552241,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0.784250137270958,0.335643173951685,0,0,0,0.163232808159148,0.282706142867882,0.216388639742091,0.995261931078505,1.32686346755009,0.611030144933625,9.19215498909928,3.58335422944858,3.9680340812073,0.269604531922708,0,0.234264445725339,0,0.19566461893209,0.485560759068186,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.253243183823515,0,0.0801588202515337,0,0,0.432271251462318,0,1.71594997861965,0,0,0,0.135904206073614,0,0.305994652908965,0.288950589901519,0,0.273810757783986,0,0,6.57218385698286,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0,0,0,0,0,0,0,0.590564889088493,0.846733320657845,0,0.272406812223151,0,0.137539436597234,0,0,0,0.242998226632099,0,0.394028536495991,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.566560457600628,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0,0.414239055347196,0.992332043623902,4.54506753365272,0,0,1.08803560673895,1.0027595760908,1.53172788381731,0.655745261419609,0.157054096250234,0.886068179966986,0.244052529803926,0.250381861413,1.14681839138014,0.221858103073705,0.372578417648301,0.276697269872462,0,0.151649117541648,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0.464033759878494,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0.491545817507439,0,1.39991177098451,0,1.72214979660816,0,1.10463570151104,0,0,0.255788742607303,0.539124056983409,0,0.873677105536111,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0.192687675289379,0,0.159633859057151,0,0,0.414943514785307,0.484426936895553,1.42769420259154,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,0.546974809018219,0,0,0,0.127762427639595,0,0.672567444437648,0,0.227662191351298,0.177404740325278,0.345701962667338,0.342976018874837,0.339848664884159,0.657727735628491,0.118193840883968,0.222462803784138,0.078493092850514,0.157115589916002,0,0,0,0,0.428859265059938,0.316027223465453,0,0.173858272302579,0,0,0.17071847709395,0,0,0,0.170426809518315,0,0.22910686854405,0,0,1.11855431797792,0,0,0,1.12929087541872,0,0,0.233939463462106,0.198950775161368,0,0.11294608203896,0.109940516745429,0.452888530700021,1.69783147837478,1.09279780251979,0,0,0,0,0,0.4226557275834,0,0,0,0.599646935549574,0,0,0,0,0,0.286679166302903,0.473314686579554,0.271965960763659,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0.378893491091197,0.267964130156178,0,0.103432995861895,0.213233981900981,0.23806443146374,0.193766729508018,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0.684466602170562,0.202056159043763,0.0717222053926763,0.332660356546013,0,0.426909383510862,0,0.269475606319761,0,0,0,0,1.00636896795513,0
|short_description=p4@RNF157
|short_description=p4@RNF157
}}
}}

Latest revision as of 14:28, 17 September 2015

Short description:p4@RNF157
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_RNF157_5end
Coexpression cluster:NA
Association with transcript: -322bp_to_ENST00000269391, ENST00000301610, ENST00000319945, NM_052916, uc002jqz.2, uc002jra.2_5end
EntrezGene:RNF157
HGNC: 29402
UniProt: Q96PX1E9PHU5
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
2.5
5.0
7.5
10.0
12.5




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data