FFCP PHASE1:Hg19::chr16:69139617..69139628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3038 | |EntrezGene=3038 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4820 | |HGNC=4820 | ||
|TSSclassifier=strong | |||
|UniProt=O00219 | |UniProt=O00219 | ||
|association_with_transcript=150bp_to_NM_001199280,uc010cfh.2_5end | |association_with_transcript=150bp_to_NM_001199280,uc010cfh.2_5end | ||
|cluster_id=chr16:69139617..69139628,+ | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_3_at_HAS3_5end | |description=CAGE_peak_3_at_HAS3_5end | ||
|id=chr16:69139617..69139628,+ | |id=chr16:69139617..69139628,+ | ||
|ontology_enrichment_celltype=CL:0002322!2.34e-13!5;CL:0000066!2.57e-09!254;CL:0002251!6.78e-07!21 | |ontology_enrichment_celltype=CL:0002322!2.34e-13!5;CL:0000066!2.57e-09!254;CL:0002251!6.78e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.63e-66;5!CL:0002321;3.55e-22;15!CL:0000540;4.86e-21;6!CL:0000404;4.86e-21;6!CL:0000148;1.55e-12;10!CL:0000147;4.07e-09;14!CL:0000650;7.52e-08;2!CL:1000500;7.52e-08;2!CL:1000618;7.52e-08;2!CL:1001318;7.52e-08;2!CL:0002173;7.52e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.64e-66,5;CL:0000540,4.86e-21,6;CL:0000031,4.86e-21,6;CL:0000404,4.86e-21,6;CL:0000047,6.02e-16,8;CL:0000148,1.55e-12,10;CL:0000541,1.55e-12,10;CL:0000147,4.07e-09,14;CL:0000650,9.19e-08,2;CL:1000500,9.19e-08,2;CL:1000618,9.19e-08,2;CL:1001318,9.19e-08,2;CL:0002173,9.19e-08,2;CL:0000133,1.28e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;4.86e-21;6 | |||
|ontology_enrichment_disease=DOID:1749!6.17e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;2.11e-14;1!DOID:3149;2.11e-14;1!DOID:3451;7.52e-08;2!DOID:4159;7.52e-08;2!DOID:0060122;7.52e-08;2!DOID:4468;7.52e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.75e-14,1;DOID:3149,2.75e-14,1;DOID:4468,6.15e-08,2;DOID:3451,8.60e-08,2;DOID:4159,8.60e-08,2;DOID:0060122,8.60e-08,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;7.52e-08;2!UBERON:0003838;7.52e-08;2!UBERON:0003586;7.52e-08;2!UBERON:0005169;7.52e-08;2!UBERON:0002321;7.52e-08;2!UBERON:0005215;7.52e-08;2!UBERON:0002303;7.52e-08;2!UBERON:0002319;7.52e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,9.19e-08,2;UBERON:0003838,9.19e-08,2;UBERON:0003586,9.19e-08,2;UBERON:0005169,9.19e-08,2;UBERON:0002321,9.19e-08,2;UBERON:0005215,9.19e-08,2;UBERON:0002303,9.19e-08,2;UBERON:0002319,9.19e-08,2 | |||
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| ||
|short_description=p3@HAS3 | |short_description=p3@HAS3 | ||
}} | }} |
Latest revision as of 14:29, 17 September 2015
Short description: | p3@HAS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HAS3_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 150bp_to_NM_001199280, uc010cfh.2_5end |
EntrezGene: | HAS3 |
HGNC: | 4820 |
UniProt: | O00219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.64e-66 | 5 |
neuron | 4.86e-21 | 6 |
neuroblast | 4.86e-21 | 6 |
electrically signaling cell | 4.86e-21 | 6 |
neuronal stem cell | 6.02e-16 | 8 |
melanocyte | 1.55e-12 | 10 |
melanoblast | 1.55e-12 | 10 |
pigment cell | 4.07e-09 | 14 |
mesangial cell | 9.19e-08 | 2 |
kidney interstitial cell | 9.19e-08 | 2 |
juxtaglomerular complex cell | 9.19e-08 | 2 |
renal interstitial pericyte | 9.19e-08 | 2 |
extraglomerular mesangial cell | 9.19e-08 | 2 |
neurectodermal cell | 1.28e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 9.19e-08 | 2 |
abdominal segment connective tissue | 9.19e-08 | 2 |
trunk connective tissue | 9.19e-08 | 2 |
interstitial tissue | 9.19e-08 | 2 |
extraglomerular mesangium | 9.19e-08 | 2 |
kidney interstitium | 9.19e-08 | 2 |
juxtaglomerular apparatus | 9.19e-08 | 2 |
mesangium | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.75e-14 | 1 |
keratoacanthoma | 2.75e-14 | 1 |
clear cell adenocarcinoma | 6.15e-08 | 2 |
skin carcinoma | 8.60e-08 | 2 |
skin cancer | 8.60e-08 | 2 |
integumentary system cancer | 8.60e-08 | 2 |