FFCP PHASE1:Hg19::chr10:22605304..22605372,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23412,100532731 | |EntrezGene=23412,100532731 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23332 | |HGNC=23332 | ||
|TSSclassifier=strong | |||
|UniProt=E9PC68,Q5T8Z0,P35226,Q9UBI1 | |UniProt=E9PC68,Q5T8Z0,P35226,Q9UBI1 | ||
|association_with_transcript=0bp_to_ENST00000376776,ENST00000376787,ENST00000444869,ENST00000456711,ENST00000463409,ENST00000468179,ENST00000470045,ENST00000472610,ENST00000475460,ENST00000489125,ENST00000496071,NM_001204062,NM_012071_5end | |||
|cluster_id=chr10:22605304..22605372,+ | |||
|description=CAGE_peak_1_at_COMMD3_5end | |||
|id=chr10:22605304..22605372,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.65e-07!57;CL:0000056!1.65e-07!57;CL:0000355!1.65e-07!57;CL:0000187!2.58e-07!54 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.30e-07,58;CL:0000056,1.30e-07,58;CL:0000355,1.30e-07,58;CL:0000187,2.03e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.87e-07!39;DOID:2531!2.01e-07!51;DOID:0060083!2.01e-07!51;DOID:8692!3.08e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.98e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.87e-07,39;DOID:2531,2.01e-07,51;DOID:0060083,2.01e-07,51;DOID:8692,3.08e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.68e-09!83;UBERON:0002329!1.68e-09!83;UBERON:0003077!1.68e-09!83;UBERON:0003059!1.68e-09!83;UBERON:0007282!1.68e-09!83;UBERON:0009618!1.68e-09!83;UBERON:0007285!1.68e-09!83;UBERON:0004290!1.36e-08!70;UBERON:0001134!2.10e-08!61;UBERON:0002036!2.10e-08!61;UBERON:0003082!2.10e-08!61;UBERON:0002385!5.03e-08!63;UBERON:0001015!5.03e-08!63;UBERON:0000383!5.03e-08!63;UBERON:0000486!6.42e-07!82 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.06e-08,71;UBERON:0003059,1.06e-08,71;UBERON:0007282,1.06e-08,71;UBERON:0004290,1.06e-08,71;UBERON:0009618,1.06e-08,71;UBERON:0007524,1.34e-08,73;UBERON:0001134,1.65e-08,62;UBERON:0002036,1.65e-08,62;UBERON:0003082,1.65e-08,62;UBERON:0003077,2.37e-08,72;UBERON:0007285,2.37e-08,72;UBERON:0002385,3.94e-08,64;UBERON:0001015,3.94e-08,64;UBERON:0000383,3.94e-08,64;UBERON:0000486,5.05e-07,83 | |||
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| ||
|short_description=p1@COMMD3 | |||
}} | }} |
Latest revision as of 14:46, 17 September 2015
Short description: | p1@COMMD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COMMD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000376776, ENST00000376787, ENST00000444869, ENST00000456711, ENST00000463409, ENST00000468179, ENST00000470045, ENST00000472610, ENST00000475460, ENST00000489125, ENST00000496071, NM_001204062, NM_012071_5end |
EntrezGene: | 23412,100532731 |
HGNC: | 23332 |
UniProt: | E9PC68Q5T8Z0P35226Q9UBI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.30e-07 | 58 |
myoblast | 1.30e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.30e-07 | 58 |
muscle cell | 2.03e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
somite | 1.06e-08 | 71 |
presomitic mesoderm | 1.06e-08 | 71 |
presumptive segmental plate | 1.06e-08 | 71 |
dermomyotome | 1.06e-08 | 71 |
trunk paraxial mesoderm | 1.06e-08 | 71 |
dense mesenchyme tissue | 1.34e-08 | 73 |
skeletal muscle tissue | 1.65e-08 | 62 |
striated muscle tissue | 1.65e-08 | 62 |
myotome | 1.65e-08 | 62 |
paraxial mesoderm | 2.37e-08 | 72 |
presumptive paraxial mesoderm | 2.37e-08 | 72 |
muscle tissue | 3.94e-08 | 64 |
musculature | 3.94e-08 | 64 |
musculature of body | 3.94e-08 | 64 |
multilaminar epithelium | 5.05e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.87e-07 | 39 |
hematologic cancer | 2.01e-07 | 51 |
immune system cancer | 2.01e-07 | 51 |
myeloid leukemia | 3.08e-07 | 31 |