FFCP PHASE1:Hg19::chr15:42448788..42448849,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=255189 | |EntrezGene=255189 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27396 | |HGNC=27396 | ||
|TSSclassifier=strong | |||
|UniProt=C9J2U1,Q68DD2,C9J281,E7EWV5,A5PKZ7 | |UniProt=C9J2U1,Q68DD2,C9J281,E7EWV5,A5PKZ7 | ||
|association_with_transcript=0bp_to_ENST00000290497,ENST00000357924,ENST00000382396,ENST00000397272,ENST00000443825,NM_213600,NR_033151,uc001zoz.2,uc001zpa.2,uc010bcr.2,uc010bcs.2_5end | |association_with_transcript=0bp_to_ENST00000290497,ENST00000357924,ENST00000382396,ENST00000397272,ENST00000443825,NM_213600,NR_033151,uc001zoz.2,uc001zpa.2,uc010bcr.2,uc010bcs.2_5end | ||
|cluster_id=chr15:42448788..42448849,- | |||
|coexpression_cluster_id=C120 | |coexpression_cluster_id=C120 | ||
|description=CAGE_peak_1_at_PLA2G4F_5end | |description=CAGE_peak_1_at_PLA2G4F_5end | ||
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|ontology_enrichment_celltype=CL:0002076!9.60e-17!43;CL:0000066!4.50e-16!254;CL:0000223!2.92e-11!59;CL:0002251!1.72e-10!21;CL:0002368!4.32e-08!13;CL:0002159!4.26e-07!13;CL:0000622!7.61e-07!5 | |ontology_enrichment_celltype=CL:0002076!9.60e-17!43;CL:0000066!4.50e-16!254;CL:0000223!2.92e-11!59;CL:0002251!1.72e-10!21;CL:0002368!4.32e-08!13;CL:0002159!4.26e-07!13;CL:0000622!7.61e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.74e-12;42!CL:0002368;1.64e-09;13!CL:0000622;6.65e-09;5!CL:0000154;2.59e-07;6!CL:0002251;3.24e-07;20!CL:0000244;4.59e-07;4!CL:0000731;4.59e-07;4 | |ontology_enrichment_celltype_v019=CL:0002076;1.74e-12;42!CL:0002368;1.64e-09;13!CL:0000622;6.65e-09;5!CL:0000154;2.59e-07;6!CL:0002251;3.24e-07;20!CL:0000244;4.59e-07;4!CL:0000731;4.59e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.59e-15,42;CL:0000223,2.57e-10,58;CL:0002368,2.73e-09,13;CL:0000622,6.20e-09,5;CL:0000066,2.15e-08,253;CL:0000154,2.44e-07,6;CL:0002251,3.49e-07,20;CL:0000244,5.94e-07,4;CL:0000731,5.94e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!6.35e-07!106 | |ontology_enrichment_disease=DOID:305!6.35e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;4.74e-07;4!DOID:1612;4.74e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;4.74e-07;4!DOID:1612;4.74e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,3.55e-07,4;DOID:1612,3.55e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.60e-19!169;UBERON:0000925!1.60e-19!169;UBERON:0006595!1.60e-19!169;UBERON:0001007!1.65e-14!155;UBERON:0001555!1.65e-14!155;UBERON:0007026!1.65e-14!155;UBERON:0007023!5.06e-14!115;UBERON:0004921!5.80e-13!129;UBERON:0004185!5.80e-13!129;UBERON:0001004!1.44e-12!72;UBERON:0000464!7.76e-12!104;UBERON:0000077!9.63e-11!130;UBERON:0000161!1.26e-10!35;UBERON:0001008!1.78e-09!45;UBERON:0006554!5.99e-09!44;UBERON:0000166!8.43e-09!21;UBERON:0000062!1.19e-08!511;UBERON:0000466!1.88e-08!126;UBERON:0000481!2.59e-08!347;UBERON:0000065!3.83e-08!53;UBERON:0001044!1.30e-07!6;UBERON:0003293!1.30e-07!6;UBERON:0003294!1.30e-07!6;UBERON:0010047!1.30e-07!6;UBERON:0000167!1.30e-07!6;UBERON:0003408!2.46e-07!10;UBERON:0000468!3.33e-07!659;UBERON:0005911!3.83e-07!82;UBERON:0005178!4.04e-07!34;UBERON:0002224!4.04e-07!34;UBERON:0005181!9.06e-07!35;UBERON:0003103!9.94e-07!69 | |ontology_enrichment_uberon=UBERON:0004119!1.60e-19!169;UBERON:0000925!1.60e-19!169;UBERON:0006595!1.60e-19!169;UBERON:0001007!1.65e-14!155;UBERON:0001555!1.65e-14!155;UBERON:0007026!1.65e-14!155;UBERON:0007023!5.06e-14!115;UBERON:0004921!5.80e-13!129;UBERON:0004185!5.80e-13!129;UBERON:0001004!1.44e-12!72;UBERON:0000464!7.76e-12!104;UBERON:0000077!9.63e-11!130;UBERON:0000161!1.26e-10!35;UBERON:0001008!1.78e-09!45;UBERON:0006554!5.99e-09!44;UBERON:0000166!8.43e-09!21;UBERON:0000062!1.19e-08!511;UBERON:0000466!1.88e-08!126;UBERON:0000481!2.59e-08!347;UBERON:0000065!3.83e-08!53;UBERON:0001044!1.30e-07!6;UBERON:0003293!1.30e-07!6;UBERON:0003294!1.30e-07!6;UBERON:0010047!1.30e-07!6;UBERON:0000167!1.30e-07!6;UBERON:0003408!2.46e-07!10;UBERON:0000468!3.33e-07!659;UBERON:0005911!3.83e-07!82;UBERON:0005178!4.04e-07!34;UBERON:0002224!4.04e-07!34;UBERON:0005181!9.06e-07!35;UBERON:0003103!9.94e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;7.13e-13;33!UBERON:0001044;1.32e-07;6!UBERON:0003293;1.32e-07;6!UBERON:0003294;1.32e-07;6!UBERON:0010047;1.32e-07;6!UBERON:0003408;1.32e-07;6!UBERON:0000167;1.32e-07;6!UBERON:0000160;1.83e-07;17!UBERON:0001555;3.17e-07;54!UBERON:0001041;4.24e-07;14 | |ontology_enrichment_uberon_v019=UBERON:0004921;7.13e-13;33!UBERON:0001044;1.32e-07;6!UBERON:0003293;1.32e-07;6!UBERON:0003294;1.32e-07;6!UBERON:0010047;1.32e-07;6!UBERON:0003408;1.32e-07;6!UBERON:0000167;1.32e-07;6!UBERON:0000160;1.83e-07;17!UBERON:0001555;3.17e-07;54!UBERON:0001041;4.24e-07;14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.99e-19,160;UBERON:0000925,9.99e-19,160;UBERON:0006595,9.99e-19,160;UBERON:0001007,1.02e-14,145;UBERON:0001555,1.02e-14,145;UBERON:0007026,1.02e-14,145;UBERON:0004921,7.46e-14,118;UBERON:0001004,3.71e-11,74;UBERON:0007023,7.06e-10,114;UBERON:0000161,1.42e-08,36;UBERON:0000065,1.90e-08,54;UBERON:0003408,3.91e-08,10;UBERON:0001044,1.19e-07,6;UBERON:0003293,1.19e-07,6;UBERON:0003294,1.19e-07,6;UBERON:0010047,1.19e-07,6;UBERON:0000167,1.19e-07,6;UBERON:0000160,1.93e-07,17;UBERON:0000915,5.08e-07,52;UBERON:0000166,6.41e-07,22;UBERON:0005178,6.72e-07,34;UBERON:0002224,6.72e-07,34 | |||
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| ||
|short_description=p1@PLA2G4F | |short_description=p1@PLA2G4F | ||
}} | }} |
Latest revision as of 15:28, 17 September 2015
Short description: | p1@PLA2G4F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PLA2G4F_5end |
Coexpression cluster: | C120_immature_salivary_tongue_skin_cervical_CD14_CD34 |
Association with transcript: | 0bp_to_ENST00000290497, ENST00000357924, ENST00000382396, ENST00000397272, ENST00000443825, NM_213600, NR_033151, uc001zoz.2, uc001zpa.2, uc010bcr.2, uc010bcs.2_5end |
EntrezGene: | PLA2G4F |
HGNC: | 27396 |
UniProt: | C9J2U1Q68DD2C9J281E7EWV5A5PKZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.59e-15 | 42 |
endodermal cell | 2.57e-10 | 58 |
respiratory epithelial cell | 2.73e-09 | 13 |
acinar cell | 6.20e-09 | 5 |
epithelial cell | 2.15e-08 | 253 |
protein secreting cell | 2.44e-07 | 6 |
epithelial cell of alimentary canal | 3.49e-07 | 20 |
transitional epithelial cell | 5.94e-07 | 4 |
urothelial cell | 5.94e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.99e-19 | 160 |
endoderm | 9.99e-19 | 160 |
presumptive endoderm | 9.99e-19 | 160 |
digestive system | 1.02e-14 | 145 |
digestive tract | 1.02e-14 | 145 |
primitive gut | 1.02e-14 | 145 |
subdivision of digestive tract | 7.46e-14 | 118 |
respiratory system | 3.71e-11 | 74 |
adult organism | 7.06e-10 | 114 |
orifice | 1.42e-08 | 36 |
respiratory tract | 1.90e-08 | 54 |
gland of gut | 3.91e-08 | 10 |
saliva-secreting gland | 1.19e-07 | 6 |
gland of oral region | 1.19e-07 | 6 |
gland of foregut | 1.19e-07 | 6 |
oral gland | 1.19e-07 | 6 |
oral cavity | 1.19e-07 | 6 |
intestine | 1.93e-07 | 17 |
thoracic segment of trunk | 5.08e-07 | 52 |
oral opening | 6.41e-07 | 22 |
thoracic cavity element | 6.72e-07 | 34 |
thoracic cavity | 6.72e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.55e-07 | 4 |
breast cancer | 3.55e-07 | 4 |