FFCP PHASE1:Hg19::chr6:30080894..30080903,-: Difference between revisions
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|id=chr6:30080894..30080903,-
|short_description=p2@TRIM31
|description=CAGE_peak_2_at_TRIM31_5end
|association_with_transcript=-11bp_to_ENST00000376734_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11074 | |EntrezGene=11074 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16289 | |HGNC=16289 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BZY9 | |UniProt=Q9BZY9 | ||
|association_with_transcript=-11bp_to_ENST00000376734_5end | |||
|cluster_id=chr6:30080894..30080903,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_2_at_TRIM31_5end | |||
|id=chr6:30080894..30080903,- | |||
|ontology_enrichment_celltype=CL:0002150!1.89e-18!3;CL:0000861!1.89e-18!3;CL:1000415!4.47e-13!2;CL:0000080!1.69e-10!6;CL:0002379!1.22e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.07e-15;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.02e-15,24;CL:0000826,1.02e-15,24;CL:0000838,1.10e-07,52;CL:0000542,1.48e-07,53;CL:0000051,1.48e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.16e-08!106;DOID:0060060!7.76e-08!1;DOID:0060061!7.76e-08!1;DOID:8691!7.76e-08!1;DOID:3620!1.22e-07!1;DOID:3565!1.22e-07!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002110!6.60e-19!3;UBERON:0006242!6.60e-19!3;UBERON:0002294!2.05e-14!7;UBERON:0001173!2.05e-14!7;UBERON:0004912!2.05e-14!7;UBERON:0002075!5.11e-12!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;8.81e-17;10!UBERON:0000178;1.49e-11;15!UBERON:0000179;1.49e-11;15!UBERON:0000463;1.49e-11;15!UBERON:0000478;1.36e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.54e-17,10;UBERON:0000358,9.54e-17,10;UBERON:0000307,9.54e-17,10;UBERON:0000091,9.54e-17,10;UBERON:0000087,9.54e-17,10;UBERON:0007010,9.54e-17,10;UBERON:0007806,9.54e-17,10;UBERON:0008780,9.54e-17,10;UBERON:0005728,9.54e-17,10;UBERON:0000178,1.58e-11,15;UBERON:0000179,1.58e-11,15;UBERON:0000463,1.58e-11,15;UBERON:0000478,1.40e-07,24 | |||
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|short_description=p2@TRIM31 | |||
}} | }} |
Latest revision as of 15:37, 17 September 2015
Short description: | p2@TRIM31 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRIM31_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -11bp_to_ENST00000376734_5end |
EntrezGene: | TRIM31 |
HGNC: | 16289 |
UniProt: | Q9BZY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.02e-15 | 24 |
pro-B cell | 1.02e-15 | 24 |
lymphoid lineage restricted progenitor cell | 1.10e-07 | 52 |
lymphocyte | 1.48e-07 | 53 |
common lymphoid progenitor | 1.48e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.54e-17 | 10 |
blastocyst | 9.54e-17 | 10 |
blastula | 9.54e-17 | 10 |
bilaminar disc | 9.54e-17 | 10 |
inner cell mass | 9.54e-17 | 10 |
cleaving embryo | 9.54e-17 | 10 |
connecting stalk | 9.54e-17 | 10 |
inner cell mass derived epiblast | 9.54e-17 | 10 |
extraembryonic mesoderm | 9.54e-17 | 10 |
blood | 1.58e-11 | 15 |
haemolymphatic fluid | 1.58e-11 | 15 |
organism substance | 1.58e-11 | 15 |
extraembryonic structure | 1.40e-07 | 24 |