FFCP PHASE1:Hg19::chr6:30294186..30294251,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56658 | |EntrezGene=56658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10065 | |HGNC=10065 | ||
|TSSclassifier=strong | |||
|UniProt=A2AAZ5 | |UniProt=A2AAZ5 | ||
|association_with_transcript=-4bp_to_ENST00000458516,uc003npz.2_5end | |association_with_transcript=-4bp_to_ENST00000458516,uc003npz.2_5end | ||
|cluster_id=chr6:30294186..30294251,+ | |||
|coexpression_cluster_id=C427 | |||
|description=CAGE_peak_1_at_TRIM39_5end | |description=CAGE_peak_1_at_TRIM39_5end | ||
|id=chr6:30294186..30294251,+ | |id=chr6:30294186..30294251,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.40e-27!140;CL:0000037!2.42e-24!172;CL:0000566!2.42e-24!172;CL:0000988!2.39e-23!182;CL:0002032!5.94e-22!165;CL:0000837!5.94e-22!165;CL:0002031!7.81e-22!124;CL:0002087!2.64e-21!119;CL:0002057!8.53e-21!42;CL:0000860!2.84e-20!45;CL:0000766!5.55e-16!76;CL:0000763!1.10e-13!112;CL:0000049!1.10e-13!112;CL:0000557!1.61e-13!71;CL:0002009!3.66e-13!65;CL:0000839!9.17e-13!70;CL:0002194!3.63e-12!63;CL:0000576!3.63e-12!63;CL:0000040!3.63e-12!63;CL:0000559!3.63e-12!63;CL:0000838!1.78e-08!52;CL:0000542!3.12e-08!53;CL:0000051!3.12e-08!53 | |ontology_enrichment_celltype=CL:0000738!7.40e-27!140;CL:0000037!2.42e-24!172;CL:0000566!2.42e-24!172;CL:0000988!2.39e-23!182;CL:0002032!5.94e-22!165;CL:0000837!5.94e-22!165;CL:0002031!7.81e-22!124;CL:0002087!2.64e-21!119;CL:0002057!8.53e-21!42;CL:0000860!2.84e-20!45;CL:0000766!5.55e-16!76;CL:0000763!1.10e-13!112;CL:0000049!1.10e-13!112;CL:0000557!1.61e-13!71;CL:0002009!3.66e-13!65;CL:0000839!9.17e-13!70;CL:0002194!3.63e-12!63;CL:0000576!3.63e-12!63;CL:0000040!3.63e-12!63;CL:0000559!3.63e-12!63;CL:0000838!1.78e-08!52;CL:0000542!3.12e-08!53;CL:0000051!3.12e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.62e-16;33!CL:0002057;5.62e-16;33!CL:0000473;9.85e-11;39!CL:0000234;9.85e-11;39!CL:0000576;1.65e-10;48!CL:0000766;8.04e-09;69!CL:0002087;1.89e-08;104!CL:0000738;9.19e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.85e-27,136;CL:0000037,2.54e-24,168;CL:0000988,3.29e-23,177;CL:0002032,6.34e-22,161;CL:0000837,6.34e-22,161;CL:0002031,6.39e-22,120;CL:0002087,2.37e-21,115;CL:0000860,8.23e-21,42;CL:0002057,8.23e-21,42;CL:0000473,3.24e-17,48;CL:0000234,3.24e-17,48;CL:0000766,3.03e-16,72;CL:0000557,9.82e-14,67;CL:0000763,1.00e-13,108;CL:0000049,1.00e-13,108;CL:0002009,2.33e-13,61;CL:0000839,5.87e-13,66;CL:0002194,2.44e-12,59;CL:0000576,2.44e-12,59;CL:0000040,2.44e-12,59;CL:0000559,2.44e-12,59;CL:0000838,1.97e-08,52;CL:0000542,3.43e-08,53;CL:0000051,3.43e-08,53 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-13!102;UBERON:0003061!1.46e-13!102;UBERON:0001474!2.37e-13!86;UBERON:0002371!2.19e-12!80;UBERON:0002193!2.34e-10!112;UBERON:0004765!1.15e-09!101;UBERON:0001434!1.15e-09!101;UBERON:0002405!2.14e-07!115 | |ontology_enrichment_uberon=UBERON:0002390!1.46e-13!102;UBERON:0003061!1.46e-13!102;UBERON:0001474!2.37e-13!86;UBERON:0002371!2.19e-12!80;UBERON:0002193!2.34e-10!112;UBERON:0004765!1.15e-09!101;UBERON:0001434!1.15e-09!101;UBERON:0002405!2.14e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.39e-13,98;UBERON:0003061,1.39e-13,98;UBERON:0001474,2.00e-13,82;UBERON:0002371,1.84e-12,76;UBERON:0004765,1.59e-11,90;UBERON:0002193,2.64e-10,108;UBERON:0001434,1.11e-08,100;UBERON:0002405,1.14e-08,93 | |||
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| ||
|short_description=p1@TRIM39 | |short_description=p1@TRIM39 | ||
}} | }} |
Latest revision as of 16:18, 17 September 2015
Short description: | p1@TRIM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM39_5end |
Coexpression cluster: | C427_Eosinophils_CD4_Peripheral_Neutrophils_Basophils_mature_Mast |
Association with transcript: | -4bp_to_ENST00000458516, uc003npz.2_5end |
EntrezGene: | TRIM39 |
HGNC: | 10065 |
UniProt: | A2AAZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.85e-27 | 136 |
hematopoietic stem cell | 2.54e-24 | 168 |
hematopoietic cell | 3.29e-23 | 177 |
hematopoietic oligopotent progenitor cell | 6.34e-22 | 161 |
hematopoietic multipotent progenitor cell | 6.34e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 6.39e-22 | 120 |
nongranular leukocyte | 2.37e-21 | 115 |
classical monocyte | 8.23e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-21 | 42 |
defensive cell | 3.24e-17 | 48 |
phagocyte | 3.24e-17 | 48 |
myeloid leukocyte | 3.03e-16 | 72 |
granulocyte monocyte progenitor cell | 9.82e-14 | 67 |
myeloid cell | 1.00e-13 | 108 |
common myeloid progenitor | 1.00e-13 | 108 |
macrophage dendritic cell progenitor | 2.33e-13 | 61 |
myeloid lineage restricted progenitor cell | 5.87e-13 | 66 |
monopoietic cell | 2.44e-12 | 59 |
monocyte | 2.44e-12 | 59 |
monoblast | 2.44e-12 | 59 |
promonocyte | 2.44e-12 | 59 |
lymphoid lineage restricted progenitor cell | 1.97e-08 | 52 |
lymphocyte | 3.43e-08 | 53 |
common lymphoid progenitor | 3.43e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.39e-13 | 98 |
blood island | 1.39e-13 | 98 |
bone element | 2.00e-13 | 82 |
bone marrow | 1.84e-12 | 76 |
skeletal element | 1.59e-11 | 90 |
hemolymphoid system | 2.64e-10 | 108 |
skeletal system | 1.11e-08 | 100 |
immune system | 1.14e-08 | 93 |