FFCP PHASE1:Hg19::chr9:72658611..72658616,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=256691 | |EntrezGene=256691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23673 | |HGNC=23673 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z304 | |UniProt=Q7Z304 | ||
|association_with_transcript=114bp_to_ENST00000377182,NM_153267,uc004ahm.2,uc004ahn.2_5end | |association_with_transcript=114bp_to_ENST00000377182,NM_153267,uc004ahm.2,uc004ahn.2_5end | ||
|cluster_id=chr9:72658611..72658616,+ | |||
|coexpression_cluster_id=C1551 | |coexpression_cluster_id=C1551 | ||
|description=CAGE_peak_10_at_MAMDC2_5end | |description=CAGE_peak_10_at_MAMDC2_5end | ||
|id=chr9:72658611..72658616,+ | |id=chr9:72658611..72658616,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002615;9.51e-18;3!CL:0000136;9.85e-16;13!CL:0002616;4.24e-14;1!CL:0000511;1.04e-13;1!CL:0002625;1.04e-13;1!CL:0000216;1.04e-13;1!CL:0002617;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,9.14e-18,3;CL:0002616,3.98e-14,1;CL:0000511,5.85e-14,1;CL:0002625,5.85e-14,1;CL:0000216,5.85e-14,1;CL:0000136,1.01e-13,15;CL:0002617,1.45e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.04e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:6193;3.07e-14;1!DOID:3350;9.24e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,3.08e-14,1;DOID:3350,9.25e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.28e-20!115 | |ontology_enrichment_uberon=UBERON:0007023!6.28e-20!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.04e-13;1!UBERON:0001136;1.04e-13;1!UBERON:0001343;1.04e-13;1!UBERON:0002082;1.04e-13;1!UBERON:0004910;1.04e-13;1!UBERON:0004813;1.04e-13;1!UBERON:0003688;2.40e-09;6!UBERON:0002358;2.40e-09;6!UBERON:0003684;2.40e-09;6!UBERON:0001178;2.40e-09;6!UBERON:0005406;1.09e-07;2!UBERON:0001905;1.70e-07;2!UBERON:0002757;1.70e-07;2!UBERON:0010134;1.70e-07;2!UBERON:0004909;1.70e-07;2!UBERON:0005408;1.70e-07;2!UBERON:0001899;1.70e-07;2!UBERON:0000473;4.15e-07;8!UBERON:0002323;7.95e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.85e-14,1;UBERON:0001343,5.85e-14,1;UBERON:0004910,5.85e-14,1;UBERON:0005154,5.85e-14,1;UBERON:0005295,5.85e-14,1;UBERON:0004813,5.85e-14,1;UBERON:0005297,5.85e-14,1;UBERON:0005294,5.85e-14,1;UBERON:0010141,5.85e-14,1;UBERON:0005891,5.85e-14,1;UBERON:0002084,1.10e-13,1;UBERON:0002082,1.10e-13,1;UBERON:0010226,1.10e-13,1;UBERON:0003688,2.35e-09,6;UBERON:0002358,2.35e-09,6;UBERON:0003684,2.35e-09,6;UBERON:0001178,2.35e-09,6;UBERON:0005406,1.05e-07,2;UBERON:0004909,1.28e-07,2;UBERON:0001905,2.25e-07,2;UBERON:0002757,2.25e-07,2;UBERON:0010134,2.25e-07,2;UBERON:0005408,2.25e-07,2;UBERON:0001899,2.25e-07,2;UBERON:0000473,3.90e-07,8;UBERON:0004871,4.28e-07,8;UBERON:0002323,9.98e-07,46 | |||
|phase1_expression=1.45342703416445,0.642301571672949,4.93340414335899,0,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,2.25976751270645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,1.63997980989798,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0,0,0.640695746278505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,6.53546923392143,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0.39961921916426,0,1.4889757501569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0.121499113316049,0,0.157611414598396,0.157363764404994,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.533937062838473,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0.0939839179798536,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,1.21245917149183,0.803892390468535,0,0,0.639701945702943,0,0,0,0.112131862580613,0.12729431655633,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0.855690109280065,0.813792356631477,0,0.402547587182052,0 | |phase1_expression=1.45342703416445,0.642301571672949,4.93340414335899,0,1.34088328328186,2.61701557230111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,2.25976751270645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0.469634776943287,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0.383382679165211,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,1.63997980989798,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0.744323423456331,0,0,0.640695746278505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0.986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,6.53546923392143,0,0,0,0.484945082442097,0,0,0,0,0.0633107959558787,0,0,0.640358984218058,0.39961921916426,0,1.4889757501569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687481272035051,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0.121499113316049,0,0.157611414598396,0.157363764404994,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.533937062838473,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.1251909307065,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,1.42899623863589,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,1.07140367175657,0.336283722218824,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0.22910686854405,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0.237840181555137,0,0,0,0.0771741581079447,0,0,0.735444965261716,0,0,0,0,0.169927114687817,0.0939839179798536,0.644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,1.21245917149183,0.803892390468535,0,0,0.639701945702943,0,0,0,0.112131862580613,0.12729431655633,0,0,0,0.134704106029175,0.143444410785353,0.332660356546013,0,0,0,0,0,0.855690109280065,0.813792356631477,0,0.402547587182052,0 | ||
|short_description=p10@MAMDC2 | |short_description=p10@MAMDC2 | ||
}} | }} |
Latest revision as of 17:33, 17 September 2015
Short description: | p10@MAMDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MAMDC2_5end |
Coexpression cluster: | C1551_epithelioid_gastric_Adipocyte_smooth_pineal_stomach_mesothelioma |
Association with transcript: | 114bp_to_ENST00000377182, NM_153267, uc004ahm.2, uc004ahn.2_5end |
EntrezGene: | MAMDC2 |
HGNC: | 23673 |
UniProt: | Q7Z304 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 9.14e-18 | 3 |
perirenal adipocyte cell | 3.98e-14 | 1 |
androgen binding protein secreting cell | 5.85e-14 | 1 |
seminiferous tubule epithelial cell | 5.85e-14 | 1 |
Sertoli cell | 5.85e-14 | 1 |
fat cell | 1.01e-13 | 15 |
adipocyte of breast | 1.45e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.85e-14 | 1 |
seminiferous tubule of testis | 5.85e-14 | 1 |
epithelium of male gonad | 5.85e-14 | 1 |
epithelial cord | 5.85e-14 | 1 |
sex cord | 5.85e-14 | 1 |
seminiferous tubule epithelium | 5.85e-14 | 1 |
testis sex cord | 5.85e-14 | 1 |
genital ridge | 5.85e-14 | 1 |
primitive sex cord of indifferent gonad | 5.85e-14 | 1 |
coelomic epithelium | 5.85e-14 | 1 |
heart left ventricle | 1.10e-13 | 1 |
cardiac ventricle | 1.10e-13 | 1 |
future cardiac ventricle | 1.10e-13 | 1 |
omentum | 2.35e-09 | 6 |
peritoneum | 2.35e-09 | 6 |
abdominal cavity | 2.35e-09 | 6 |
visceral peritoneum | 2.35e-09 | 6 |
perirenal fat | 1.05e-07 | 2 |
epithelium of gonad | 1.28e-07 | 2 |
pineal body | 2.25e-07 | 2 |
regional part of epithalamus | 2.25e-07 | 2 |
secretory circumventricular organ | 2.25e-07 | 2 |
circumventricular organ | 2.25e-07 | 2 |
epithalamus | 2.25e-07 | 2 |
testis | 3.90e-07 | 8 |
somatic layer of lateral plate mesoderm | 4.28e-07 | 8 |
body cavity | 9.98e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 3.08e-14 | 1 |
mesenchymal cell neoplasm | 9.25e-08 | 2 |