FFCP PHASE1:Hg19::chr16:71560323..71560348,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10164 | |EntrezGene=10164 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1972 | |HGNC=1972 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002fao.2_5end | |association_with_transcript=0bp_to_uc002fao.2_5end | ||
|cluster_id=chr16:71560323..71560348,+ | |||
|coexpression_cluster_id=C346 | |coexpression_cluster_id=C346 | ||
|description=CAGE_peak_1_at_CHST4_5end | |description=CAGE_peak_1_at_CHST4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!8.26e-11!5;CL:0000039!9.35e-10!7;CL:0000586!9.35e-10!7 | |ontology_enrichment_celltype=CL:0002322!8.26e-11!5;CL:0000039!9.35e-10!7;CL:0000586!9.35e-10!7 | ||
|ontology_enrichment_celltype_v019=CL:0002322;8.28e-40;5!CL:0000039;1.77e-18;7!CL:0000586;1.77e-18;7!CL:0002321;3.15e-13;15!CL:0000540;4.71e-13;6!CL:0000404;4.71e-13;6!CL:0000148;9.94e-08;10 | |ontology_enrichment_celltype_v019=CL:0002322;8.28e-40;5!CL:0000039;1.77e-18;7!CL:0000586;1.77e-18;7!CL:0002321;3.15e-13;15!CL:0000540;4.71e-13;6!CL:0000404;4.71e-13;6!CL:0000148;9.94e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.65e-40,5;CL:0000039,2.08e-18,7;CL:0000586,2.08e-18,7;CL:0000540,4.44e-13,6;CL:0000031,4.44e-13,6;CL:0000404,4.44e-13,6;CL:0000047,6.17e-10,8;CL:0000148,9.38e-08,10;CL:0000541,9.38e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.02e-19;10!UBERON:0005564;1.02e-19;10!CL:0000031;4.71e-13;6!UBERON:0006242;7.97e-10;1 | |ontology_enrichment_development_v019=UBERON:0009117;1.02e-19;10!UBERON:0005564;1.02e-19;10!CL:0000031;4.71e-13;6!UBERON:0006242;7.97e-10;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:74;2.25e-17;2!DOID:2355;9.43e-10;1!DOID:225;2.35e-09;1!DOID:1287;3.84e-09;4!DOID:3111;4.15e-09;1!DOID:3603;4.15e-09;1 | |ontology_enrichment_disease_v019=DOID:74;2.25e-17;2!DOID:2355;9.43e-10;1!DOID:225;2.35e-09;1!DOID:1287;3.84e-09;4!DOID:3111;4.15e-09;1!DOID:3603;4.15e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:74,2.07e-17,2;DOID:2355,9.44e-10,1;DOID:225,2.16e-09,1;DOID:3111,3.25e-09,1;DOID:3603,3.25e-09,1;DOID:1287,3.68e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002619!9.26e-08!22;UBERON:0001950!3.61e-07!20;UBERON:0007023!9.34e-07!115 | |ontology_enrichment_uberon=UBERON:0002619!9.26e-08!22;UBERON:0001950!3.61e-07!20;UBERON:0007023!9.34e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.37e-16;8!UBERON:0003135;7.72e-12;11!UBERON:0002323;5.39e-10;45!UBERON:0000991;2.54e-09;21!UBERON:0002372;4.15e-09;1!UBERON:0001961;4.15e-09;1!UBERON:0001744;4.15e-09;1!UBERON:0001042;4.15e-09;1!UBERON:0001735;4.15e-09;1!UBERON:0000922;9.66e-08;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;3.37e-16;8!UBERON:0003135;7.72e-12;11!UBERON:0002323;5.39e-10;45!UBERON:0000991;2.54e-09;21!UBERON:0002372;4.15e-09;1!UBERON:0001961;4.15e-09;1!UBERON:0001744;4.15e-09;1!UBERON:0001042;4.15e-09;1!UBERON:0001735;4.15e-09;1!UBERON:0000922;9.66e-08;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.87e-16,8;UBERON:0003135,8.53e-12,11;UBERON:0002323,3.89e-10,46;UBERON:0004458,1.89e-09,49;UBERON:0000991,2.57e-09,21;UBERON:0009196,2.57e-09,21;UBERON:0009117,2.57e-09,21;UBERON:0005564,2.57e-09,21;UBERON:0002372,5.28e-09,1;UBERON:0001961,5.28e-09,1;UBERON:0001744,5.28e-09,1;UBERON:0001735,5.28e-09,1;UBERON:0004176,6.94e-09,22;UBERON:0003886,1.78e-08,54;UBERON:0002553,2.21e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0.853015394924529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,3.53723747775827,2.12047629314376,2.20768491452085,1.96956004529204,3.28017106138317,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649243880549111,0,0,0.156679895773023,0,0,0,0,0.851692475380653,0,0.921722292925374,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,4.92339221844278,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.0897576444097721,0.434589487688032,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0.485560759068186,0,0,0,0.505492637027904,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0.391102765469606,0.160317640503067,20.4914874949778,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,6.18115324080227,0,0.408610218334727,3.85807556316046,5.22649859069488,7.89336642255452,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,1.46552233678082,0,0,0,0,1.40963004463334,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,1.69049698686902,0,2.24052632357696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.376051641746286,0.20170506870352,2.34454203369928,0,0,0.443568258651136,0,0,0.413373593002368,0.126831620387814,0,0,0,0,0.255524855279191,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.131545547125698,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09726132484042,0,0,0,0,0,0,0,0,0,0.603851374266694,0,0,0,0,0,0.196308467114945,0,0,0,0,0,4.39741086069687,0,0,0.160482733378337,0,0.458729283404541,0,0,0.135982980381829,0,0,0,0,0,0.378499274505237,0,0,4.18154201942125,1.60330443159336,1.01084389488329,3.50990555009325,0,0,0,0,0.852935927603924,0,0,0,0,0,0,0.217716747896961,0,1.0776328482334,1.5061663132462,0,0,0.320182037633146,0,0,0,0,0.406896178315738,0,0,0 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| ||
|short_description=p1@CHST4 | |short_description=p1@CHST4 | ||
}} | }} |
Latest revision as of 17:42, 17 September 2015
Short description: | p1@CHST4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHST4_5end |
Coexpression cluster: | C346_gall_ductus_seminal_temporal_duodenum_Hepatocyte_liver |
Association with transcript: | 0bp_to_uc002fao.2_5end |
EntrezGene: | CHST4 |
HGNC: | 1972 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.65e-40 | 5 |
germ line cell | 2.08e-18 | 7 |
germ cell | 2.08e-18 | 7 |
neuron | 4.44e-13 | 6 |
neuroblast | 4.44e-13 | 6 |
electrically signaling cell | 4.44e-13 | 6 |
neuronal stem cell | 6.17e-10 | 8 |
melanocyte | 9.38e-08 | 10 |
melanoblast | 9.38e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 3.87e-16 | 8 |
male reproductive organ | 8.53e-12 | 11 |
body cavity | 3.89e-10 | 46 |
body cavity or lining | 1.89e-09 | 49 |
gonad | 2.57e-09 | 21 |
indifferent external genitalia | 2.57e-09 | 21 |
indifferent gonad | 2.57e-09 | 21 |
gonad primordium | 2.57e-09 | 21 |
tonsil | 5.28e-09 | 1 |
mucosa-associated lymphoid tissue | 5.28e-09 | 1 |
lymphoid tissue | 5.28e-09 | 1 |
tonsillar ring | 5.28e-09 | 1 |
external genitalia | 6.94e-09 | 22 |
body cavity precursor | 1.78e-08 | 54 |
anatomical cavity | 2.21e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system disease | 2.07e-17 | 2 |
anemia | 9.44e-10 | 1 |
syndrome | 2.16e-09 | 1 |
cystadenocarcinoma | 3.25e-09 | 1 |
mucinous cystadenocarcinoma | 3.25e-09 | 1 |
cardiovascular system disease | 3.68e-09 | 4 |