FFCP PHASE1:Hg19::chr6:30655085..30655101,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NYC8 | |UniProt=Q6NYC8 | ||
|association_with_transcript=0bp_to_NM_001134870,uc003nra.2_5end | |association_with_transcript=0bp_to_NM_001134870,uc003nra.2_5end | ||
|cluster_id=chr6:30655085..30655101,- | |||
|description=CAGE_peak_9_at_PPP1R18_5end | |description=CAGE_peak_9_at_PPP1R18_5end | ||
|id=chr6:30655085..30655101,- | |id=chr6:30655085..30655101,- | ||
|ontology_enrichment_celltype=CL:0002057!4.86e-14!42;CL:0000860!4.91e-12!45;CL:0000738!3.30e-10!140;CL:0002087!4.37e-10!119;CL:0000766!4.10e-09!76;CL:0002031!5.30e-09!124;CL:0002009!1.30e-08!65;CL:0002194!3.97e-08!63;CL:0000576!3.97e-08!63;CL:0000040!3.97e-08!63;CL:0000559!3.97e-08!63;CL:0000945!5.77e-08!24;CL:0000826!5.77e-08!24;CL:0000557!2.63e-07!71;CL:0002032!8.90e-07!165;CL:0000837!8.90e-07!165 | |ontology_enrichment_celltype=CL:0002057!4.86e-14!42;CL:0000860!4.91e-12!45;CL:0000738!3.30e-10!140;CL:0002087!4.37e-10!119;CL:0000766!4.10e-09!76;CL:0002031!5.30e-09!124;CL:0002009!1.30e-08!65;CL:0002194!3.97e-08!63;CL:0000576!3.97e-08!63;CL:0000040!3.97e-08!63;CL:0000559!3.97e-08!63;CL:0000945!5.77e-08!24;CL:0000826!5.77e-08!24;CL:0000557!2.63e-07!71;CL:0002032!8.90e-07!165;CL:0000837!8.90e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.77e-16;33!CL:0002057;4.77e-16;33!CL:0000473;1.57e-11;39!CL:0000234;1.57e-11;39!CL:0000945;3.21e-08;24!CL:0000576;9.24e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.61e-15,42;CL:0002057,3.61e-15,42;CL:0000473,1.26e-13,48;CL:0000234,1.26e-13,48;CL:0000738,2.43e-12,136;CL:0000766,6.01e-12,72;CL:0002087,8.55e-12,115;CL:0002009,2.77e-11,61;CL:0002031,9.84e-11,120;CL:0002194,1.10e-10,59;CL:0000576,1.10e-10,59;CL:0000040,1.10e-10,59;CL:0000559,1.10e-10,59;CL:0000557,1.16e-09,67;CL:0002032,3.36e-09,161;CL:0000837,3.36e-09,161;CL:0000839,1.02e-08,66;CL:0000037,1.27e-08,168;CL:0000988,2.18e-08,177;CL:0000945,3.03e-08,24;CL:0000826,3.03e-08,24;CL:0000763,7.77e-07,108;CL:0000049,7.77e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.84e-09!112;UBERON:0002390!4.45e-08!102;UBERON:0003061!4.45e-08!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.90e-11,108;UBERON:0002390,8.39e-11,98;UBERON:0003061,8.39e-11,98;UBERON:0002405,1.57e-10,93;UBERON:0001474,5.39e-09,82;UBERON:0002371,6.71e-09,76;UBERON:0004765,1.94e-08,90;UBERON:0001434,9.36e-07,100 | |||
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| ||
|short_description=p9@PPP1R18 | |short_description=p9@PPP1R18 | ||
}} | }} |
Latest revision as of 17:49, 17 September 2015
Short description: | p9@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PPP1R18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001134870, uc003nra.2_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | Q6NYC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.61e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.61e-15 | 42 |
defensive cell | 1.26e-13 | 48 |
phagocyte | 1.26e-13 | 48 |
leukocyte | 2.43e-12 | 136 |
myeloid leukocyte | 6.01e-12 | 72 |
nongranular leukocyte | 8.55e-12 | 115 |
macrophage dendritic cell progenitor | 2.77e-11 | 61 |
hematopoietic lineage restricted progenitor cell | 9.84e-11 | 120 |
monopoietic cell | 1.10e-10 | 59 |
monocyte | 1.10e-10 | 59 |
monoblast | 1.10e-10 | 59 |
promonocyte | 1.10e-10 | 59 |
granulocyte monocyte progenitor cell | 1.16e-09 | 67 |
hematopoietic oligopotent progenitor cell | 3.36e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.36e-09 | 161 |
myeloid lineage restricted progenitor cell | 1.02e-08 | 66 |
hematopoietic stem cell | 1.27e-08 | 168 |
hematopoietic cell | 2.18e-08 | 177 |
lymphocyte of B lineage | 3.03e-08 | 24 |
pro-B cell | 3.03e-08 | 24 |
myeloid cell | 7.77e-07 | 108 |
common myeloid progenitor | 7.77e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.90e-11 | 108 |
hematopoietic system | 8.39e-11 | 98 |
blood island | 8.39e-11 | 98 |
immune system | 1.57e-10 | 93 |
bone element | 5.39e-09 | 82 |
bone marrow | 6.71e-09 | 76 |
skeletal element | 1.94e-08 | 90 |
skeletal system | 9.36e-07 | 100 |