FFCP PHASE1:Hg19::chr9:73424904..73424908,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406987 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31582 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=91bp_to_NR_029621,uc004aih.1_5end | |||
|cluster_id=chr9:73424904..73424908,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_1_at_MIR204_5end | |||
|id=chr9:73424904..73424908,- | |||
|ontology_enrichment_celltype=CL:0000064!8.79e-13!3;CL:0005012!8.79e-13!3;CL:0000067!8.79e-13!3;CL:0002304!8.79e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.03e-17;3!CL:0000067;1.03e-17;3!CL:0005012;1.03e-17;3!CL:0002304;1.03e-17;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.12e-17,3;CL:0000067,1.12e-17,3;CL:0005012,1.12e-17,3;CL:0002304,1.12e-17,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;8.00e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!8.64e-27!86;UBERON:0007284!8.64e-27!86;UBERON:0002346!2.67e-25!90;UBERON:0003056!3.45e-21!61;UBERON:0001049!1.16e-20!57;UBERON:0005068!1.16e-20!57;UBERON:0006241!1.16e-20!57;UBERON:0007135!1.16e-20!57;UBERON:0005743!1.48e-18!86;UBERON:0000033!4.03e-18!123;UBERON:0002616!1.08e-17!59;UBERON:0000153!5.81e-17!129;UBERON:0007811!5.81e-17!129;UBERON:0000073!2.80e-16!94;UBERON:0001016!2.80e-16!94;UBERON:0000955!4.23e-16!69;UBERON:0006238!4.23e-16!69;UBERON:0007625!4.47e-16!11;UBERON:0001017!2.25e-14!82;UBERON:0007023!6.79e-14!115;UBERON:0000970!6.83e-14!20;UBERON:0004121!1.98e-13!169;UBERON:0002104!3.78e-13!21;UBERON:0000924!5.91e-13!173;UBERON:0006601!5.91e-13!173;UBERON:0001778!8.79e-13!3;UBERON:0001775!8.79e-13!3;UBERON:0001896!1.57e-12!3;UBERON:0005290!1.57e-12!3;UBERON:0010096!1.57e-12!3;UBERON:0000020!7.41e-12!23;UBERON:0002298!7.53e-12!8;UBERON:0002780!8.11e-12!41;UBERON:0001890!8.11e-12!41;UBERON:0006240!8.11e-12!41;UBERON:0003076!1.06e-11!15;UBERON:0003057!1.06e-11!15;UBERON:0000019!1.13e-11!19;UBERON:0000047!1.13e-11!19;UBERON:0004088!1.13e-11!19;UBERON:0003072!1.13e-11!19;UBERON:0003071!1.13e-11!19;UBERON:0004128!1.13e-11!19;UBERON:0003080!1.78e-11!42;UBERON:0001032!2.72e-11!24;UBERON:0004456!2.72e-11!24;UBERON:0004733!3.83e-11!12;UBERON:0002028!3.83e-11!12;UBERON:0007277!3.83e-11!12;UBERON:0002791!7.93e-11!33;UBERON:0001893!1.87e-10!34;UBERON:0001456!1.98e-10!21;UBERON:0004732!3.13e-10!13;UBERON:0000475!7.94e-10!365;UBERON:0000488!1.10e-09!4;UBERON:0000483!3.23e-09!309;UBERON:0000119!4.80e-09!312;UBERON:0002020!1.13e-08!34;UBERON:0003528!1.13e-08!34;UBERON:0000956!6.37e-08!25;UBERON:0000203!6.37e-08!25;UBERON:0000481!7.57e-08!347;UBERON:0000966!1.21e-07!5;UBERON:0005388!1.21e-07!5;UBERON:0001802!1.21e-07!5;UBERON:0001869!1.73e-07!32;UBERON:0005085!3.52e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.03e-17;3!UBERON:0001778;1.03e-17;3!UBERON:0001775;1.03e-17;3!UBERON:0005290;1.03e-17;3!UBERON:0000488;1.21e-13;4!UBERON:0000019;1.77e-11;19!UBERON:0000047;1.77e-11;19!UBERON:0004088;1.77e-11;19!UBERON:0010230;1.77e-11;19!UBERON:0000966;2.94e-11;5!UBERON:0005388;2.94e-11;5!UBERON:0001802;2.94e-11;5!UBERON:0000970;5.85e-11;20!UBERON:0002104;1.73e-10;21!UBERON:0001456;1.73e-10;21!UBERON:0000020;1.14e-09;23!UBERON:0002203;1.50e-09;6!UBERON:0001768;1.50e-09;6!UBERON:0002200;1.50e-09;6!UBERON:0002298;1.50e-09;6!UBERON:0001032;2.61e-09;24!UBERON:0004456;2.61e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,9.46e-18,3;UBERON:0005290,9.46e-18,3;UBERON:0010096,9.46e-18,3;UBERON:0001778,1.12e-17,3;UBERON:0001775,1.12e-17,3;UBERON:0000488,1.29e-13,4;UBERON:0000019,6.00e-11,20;UBERON:0000047,6.00e-11,20;UBERON:0010312,6.00e-11,20;UBERON:0004088,6.00e-11,20;UBERON:0010230,6.00e-11,20;UBERON:0003072,6.00e-11,20;UBERON:0004128,6.00e-11,20;UBERON:0003071,6.00e-11,20;UBERON:0000970,1.77e-10,21;UBERON:0002104,1.77e-10,21;UBERON:0001456,4.74e-10,22;UBERON:0000966,1.32e-09,6;UBERON:0005388,1.32e-09,6;UBERON:0001802,1.32e-09,6;UBERON:0002298,1.44e-09,6;UBERON:0002203,1.57e-09,6;UBERON:0001768,1.57e-09,6;UBERON:0002200,1.57e-09,6;UBERON:0000020,2.67e-09,24;UBERON:0001032,2.67e-09,24;UBERON:0004456,2.67e-09,24;UBERON:0005085,1.99e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.443458794925128,1.05401742831751,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.552896299656123,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,1.14681839138014,0.998361463831671,0.18628920882415,10.791193525026,0,0,0.570930667089935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0.215927591218621,0,3.14496794377288,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0,0.109940516745429,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.535928260312357,0,0.103432995861895,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@MIR204 | |||
}} |
Latest revision as of 18:40, 17 September 2015
Short description: | p1@MIR204 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR204_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | 91bp_to_NR_029621, uc004aih.1_5end |
EntrezGene: | MIR204 |
HGNC: | 31582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.12e-17 | 3 |
ciliated epithelial cell | 1.12e-17 | 3 |
multi-ciliated epithelial cell | 1.12e-17 | 3 |
non-pigmented ciliary epithelial cell | 1.12e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 9.46e-18 | 3 |
myelencephalon | 9.46e-18 | 3 |
future myelencephalon | 9.46e-18 | 3 |
ciliary epithelium | 1.12e-17 | 3 |
ciliary body | 1.12e-17 | 3 |
atypical epithelium | 1.29e-13 | 4 |
camera-type eye | 6.00e-11 | 20 |
simple eye | 6.00e-11 | 20 |
immature eye | 6.00e-11 | 20 |
ocular region | 6.00e-11 | 20 |
eyeball of camera-type eye | 6.00e-11 | 20 |
optic cup | 6.00e-11 | 20 |
optic vesicle | 6.00e-11 | 20 |
eye primordium | 6.00e-11 | 20 |
eye | 1.77e-10 | 21 |
visual system | 1.77e-10 | 21 |
face | 4.74e-10 | 22 |
retina | 1.32e-09 | 6 |
photoreceptor array | 1.32e-09 | 6 |
posterior segment of eyeball | 1.32e-09 | 6 |
brainstem | 1.44e-09 | 6 |
vasculature of eye | 1.57e-09 | 6 |
uvea | 1.57e-09 | 6 |
vasculature of head | 1.57e-09 | 6 |
sense organ | 2.67e-09 | 24 |
sensory system | 2.67e-09 | 24 |
entire sense organ system | 2.67e-09 | 24 |
ectodermal placode | 1.99e-07 | 31 |