FFCP PHASE1:Hg19::chr15:44968000..44968011,-: Difference between revisions
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|id=chr15:44968000..44968011,-
|short_description=p7@PATL2
|description=CAGE_peak_7_at_PATL2_5end
|association_with_transcript=-183bp_to_ENST00000558481_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=197135 | |EntrezGene=197135 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33630 | |HGNC=33630 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-183bp_to_ENST00000558481_5end | |||
|cluster_id=chr15:44968000..44968011,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_7_at_PATL2_5end | |||
|id=chr15:44968000..44968011,- | |||
|ontology_enrichment_celltype=CL:0000625!2.72e-52!11;CL:0000791!3.98e-43!18;CL:0000789!3.98e-43!18;CL:0002420!3.98e-43!18;CL:0002419!3.98e-43!18;CL:0000790!3.98e-43!18;CL:0000084!3.05e-30!25;CL:0000827!3.05e-30!25;CL:0000838!2.25e-20!52;CL:0000542!6.40e-20!53;CL:0000051!6.40e-20!53;CL:0000623!2.10e-15!3;CL:0000825!2.10e-15!3;CL:0000842!1.17e-14!3;CL:0002087!2.87e-14!119;CL:0000738!3.54e-14!140;CL:0000224!4.04e-11!4;CL:0000037!1.51e-10!172;CL:0000566!1.51e-10!172;CL:0000893!3.34e-10!2;CL:0002489!3.34e-10!2;CL:0000809!3.34e-10!2;CL:0000808!3.34e-10!2;CL:0000894!3.34e-10!2;CL:0000806!3.34e-10!2;CL:0000807!3.34e-10!2;CL:0000805!3.34e-10!2;CL:0002425!3.34e-10!2;CL:0000988!1.12e-09!182;CL:0002031!1.44e-09!124;CL:0002032!4.67e-08!165;CL:0000837!4.67e-08!165;CL:0000080!1.46e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;4.70e-90;11!CL:0000791;9.16e-55;18!CL:0000789;9.16e-55;18!CL:0002419;9.16e-55;18!CL:0000084;3.26e-39;25!CL:0000623;1.64e-17;3!CL:0000542;1.65e-15;53!CL:0000771;1.05e-07;2!CL:0000094;2.61e-07;8!CL:0002087;4.85e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,3.64e-90,11;CL:0000791,7.84e-55,18;CL:0000789,7.84e-55,18;CL:0002420,7.84e-55,18;CL:0002419,7.84e-55,18;CL:0000790,7.84e-55,18;CL:0000084,2.91e-39,25;CL:0000827,2.91e-39,25;CL:0000838,1.25e-27,52;CL:0000542,4.37e-27,53;CL:0000051,4.37e-27,53;CL:0000623,1.18e-17,3;CL:0000825,1.18e-17,3;CL:0000738,3.40e-16,136;CL:0002087,5.84e-14,115;CL:0000037,8.36e-13,168;CL:0000988,4.55e-12,177;CL:0002032,1.87e-11,161;CL:0000837,1.87e-11,161;CL:0002031,4.06e-11,120;CL:0000771,9.87e-08,2;CL:0000094,2.53e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;9.16e-55;18!CL:0000051;1.65e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.11e-11!15;UBERON:0000179!7.11e-11!15;UBERON:0000463!7.11e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.14e-08;15!UBERON:0000179;6.14e-08;15!UBERON:0000463;6.14e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.36e-08,15;UBERON:0000179,7.36e-08,15;UBERON:0000463,7.36e-08,15 | |||
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|short_description=p7@PATL2 | |||
}} | }} |
Latest revision as of 18:59, 17 September 2015
Short description: | p7@PATL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PATL2_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -183bp_to_ENST00000558481_5end |
EntrezGene: | PATL2 |
HGNC: | 33630 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 3.64e-90 | 11 |
mature alpha-beta T cell | 7.84e-55 | 18 |
alpha-beta T cell | 7.84e-55 | 18 |
immature T cell | 7.84e-55 | 18 |
mature T cell | 7.84e-55 | 18 |
immature alpha-beta T cell | 7.84e-55 | 18 |
T cell | 2.91e-39 | 25 |
pro-T cell | 2.91e-39 | 25 |
lymphoid lineage restricted progenitor cell | 1.25e-27 | 52 |
lymphocyte | 4.37e-27 | 53 |
common lymphoid progenitor | 4.37e-27 | 53 |
natural killer cell | 1.18e-17 | 3 |
pro-NK cell | 1.18e-17 | 3 |
leukocyte | 3.40e-16 | 136 |
nongranular leukocyte | 5.84e-14 | 115 |
hematopoietic stem cell | 8.36e-13 | 168 |
hematopoietic cell | 4.55e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 4.06e-11 | 120 |
eosinophil | 9.87e-08 | 2 |
granulocyte | 2.53e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
blood | 7.36e-08 | 15 |
haemolymphatic fluid | 7.36e-08 | 15 |
organism substance | 7.36e-08 | 15 |