FFCP PHASE1:Hg19::chr1:157670537..157670568,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:157670537..157670568,-
|short_description=p1@FCRL3
|description=CAGE_peak_1_at_FCRL3_5end
|association_with_transcript=-2bp_to_ENST00000496769_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115352 | |EntrezGene=115352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18506 | |HGNC=18506 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000496769_5end | |||
|cluster_id=chr1:157670537..157670568,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_1_at_FCRL3_5end | |||
|id=chr1:157670537..157670568,- | |||
|ontology_enrichment_celltype=CL:0000542!4.97e-41!53;CL:0000051!4.97e-41!53;CL:0000838!1.03e-39!52;CL:0002087!3.21e-38!119;CL:0000738!1.77e-35!140;CL:0002031!5.10e-30!124;CL:0000037!1.51e-25!172;CL:0000566!1.51e-25!172;CL:0000945!1.74e-24!24;CL:0000826!1.74e-24!24;CL:0002032!3.41e-23!165;CL:0000837!3.41e-23!165;CL:0000988!6.36e-23!182;CL:0000236!4.46e-19!14;CL:0000791!8.01e-17!18;CL:0000789!8.01e-17!18;CL:0002420!8.01e-17!18;CL:0002419!8.01e-17!18;CL:0000790!8.01e-17!18;CL:0000625!1.42e-14!11;CL:0000084!1.43e-13!25;CL:0000827!1.43e-13!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.52e-29;13!CL:0000945;1.44e-26;24!CL:0000542;1.33e-24;53!CL:0000791;1.81e-16;18!CL:0000789;1.81e-16;18!CL:0002419;1.81e-16;18!CL:0000625;2.49e-16;11!CL:0000084;4.23e-11;25!CL:0002087;2.95e-10;104!CL:0000226;1.64e-08;3!CL:0000842;1.64e-08;3!CL:0000623;6.90e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.05e-42,53;CL:0000051,4.05e-42,53;CL:0000838,3.69e-40,52;CL:0000236,6.46e-32,14;CL:0002087,2.34e-29,115;CL:0000738,1.45e-28,136;CL:0000945,1.34e-26,24;CL:0000826,1.34e-26,24;CL:0002031,1.51e-21,120;CL:0000037,8.93e-21,168;CL:0000988,4.22e-19,177;CL:0002032,1.71e-17,161;CL:0000837,1.71e-17,161;CL:0000791,1.42e-16,18;CL:0000789,1.42e-16,18;CL:0002420,1.42e-16,18;CL:0002419,1.42e-16,18;CL:0000790,1.42e-16,18;CL:0000625,1.75e-16,11;CL:0000084,3.59e-11,25;CL:0000827,3.59e-11,25;CL:0000226,1.64e-08,3;CL:0000842,1.64e-08,3;CL:0000623,8.30e-08,3;CL:0000825,8.30e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.33e-24;53!CL:0000790;1.81e-16;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.52e-14!15;UBERON:0000179!8.52e-14!15;UBERON:0000463!8.52e-14!15;UBERON:0007023!2.84e-13!115;UBERON:0002390!9.06e-11!102;UBERON:0003061!9.06e-11!102;UBERON:0002193!1.80e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.02e-23;15!UBERON:0000179;2.02e-23;15!UBERON:0000463;2.02e-23;15!UBERON:0002390;6.74e-16;32!UBERON:0002193;3.10e-11;42!UBERON:0004177;1.49e-08;5!UBERON:0005057;1.49e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.07e-23,15;UBERON:0000179,2.07e-23,15;UBERON:0000463,2.07e-23,15;UBERON:0002193,6.43e-09,108;UBERON:0002390,1.98e-08,98;UBERON:0003061,1.98e-08,98 | |||
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| ||
|short_description=p1@FCRL3 | |||
}} | }} |
Latest revision as of 19:24, 17 September 2015
Short description: | p1@FCRL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FCRL3_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -2bp_to_ENST00000496769_5end |
EntrezGene: | FCRL3 |
HGNC: | 18506 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.05e-42 | 53 |
common lymphoid progenitor | 4.05e-42 | 53 |
lymphoid lineage restricted progenitor cell | 3.69e-40 | 52 |
B cell | 6.46e-32 | 14 |
nongranular leukocyte | 2.34e-29 | 115 |
leukocyte | 1.45e-28 | 136 |
lymphocyte of B lineage | 1.34e-26 | 24 |
pro-B cell | 1.34e-26 | 24 |
hematopoietic lineage restricted progenitor cell | 1.51e-21 | 120 |
hematopoietic stem cell | 8.93e-21 | 168 |
hematopoietic cell | 4.22e-19 | 177 |
hematopoietic oligopotent progenitor cell | 1.71e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-17 | 161 |
mature alpha-beta T cell | 1.42e-16 | 18 |
alpha-beta T cell | 1.42e-16 | 18 |
immature T cell | 1.42e-16 | 18 |
mature T cell | 1.42e-16 | 18 |
immature alpha-beta T cell | 1.42e-16 | 18 |
CD8-positive, alpha-beta T cell | 1.75e-16 | 11 |
T cell | 3.59e-11 | 25 |
pro-T cell | 3.59e-11 | 25 |
single nucleate cell | 1.64e-08 | 3 |
mononuclear cell | 1.64e-08 | 3 |
natural killer cell | 8.30e-08 | 3 |
pro-NK cell | 8.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 2.07e-23 | 15 |
haemolymphatic fluid | 2.07e-23 | 15 |
organism substance | 2.07e-23 | 15 |
hemolymphoid system | 6.43e-09 | 108 |
hematopoietic system | 1.98e-08 | 98 |
blood island | 1.98e-08 | 98 |