FFCP PHASE1:Hg19::chr15:45021191..45021204,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140691 | |EntrezGene=140691 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17857 | |HGNC=17857 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560141_5end | |association_with_transcript=0bp_to_ENST00000560141_5end | ||
|cluster_id=chr15:45021191..45021204,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_4_at_TRIM69_5end | |description=CAGE_peak_4_at_TRIM69_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.85e-21!42;CL:0000738!3.13e-21!140;CL:0000860!1.15e-18!45;CL:0002087!7.68e-18!119;CL:0002031!2.86e-17!124;CL:0000766!1.63e-15!76;CL:0002009!1.67e-15!65;CL:0000557!3.49e-15!71;CL:0002194!2.20e-14!63;CL:0000576!2.20e-14!63;CL:0000040!2.20e-14!63;CL:0000559!2.20e-14!63;CL:0000839!1.36e-13!70;CL:0000988!1.44e-12!182;CL:0000037!8.14e-12!172;CL:0000566!8.14e-12!172;CL:0002032!1.14e-11!165;CL:0000837!1.14e-11!165;CL:0000763!7.94e-08!112;CL:0000049!7.94e-08!112 | |ontology_enrichment_celltype=CL:0002057!1.85e-21!42;CL:0000738!3.13e-21!140;CL:0000860!1.15e-18!45;CL:0002087!7.68e-18!119;CL:0002031!2.86e-17!124;CL:0000766!1.63e-15!76;CL:0002009!1.67e-15!65;CL:0000557!3.49e-15!71;CL:0002194!2.20e-14!63;CL:0000576!2.20e-14!63;CL:0000040!2.20e-14!63;CL:0000559!2.20e-14!63;CL:0000839!1.36e-13!70;CL:0000988!1.44e-12!182;CL:0000037!8.14e-12!172;CL:0000566!8.14e-12!172;CL:0002032!1.14e-11!165;CL:0000837!1.14e-11!165;CL:0000763!7.94e-08!112;CL:0000049!7.94e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.45e-47;33!CL:0002057;5.45e-47;33!CL:0000473;7.15e-36;39!CL:0000234;7.15e-36;39!CL:0000576;9.71e-26;48!CL:0000766;1.51e-18;69!CL:0002087;5.36e-09;104!CL:0000763;3.62e-08;100 | |ontology_enrichment_celltype_v019=CL:0000860;5.45e-47;33!CL:0002057;5.45e-47;33!CL:0000473;7.15e-36;39!CL:0000234;7.15e-36;39!CL:0000576;9.71e-26;48!CL:0000766;1.51e-18;69!CL:0002087;5.36e-09;104!CL:0000763;3.62e-08;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.43e-46,42;CL:0002057,2.43e-46,42;CL:0000473,4.06e-43,48;CL:0000234,4.06e-43,48;CL:0002009,1.64e-34,61;CL:0002194,4.77e-33,59;CL:0000576,4.77e-33,59;CL:0000040,4.77e-33,59;CL:0000559,4.77e-33,59;CL:0000766,5.54e-33,72;CL:0000557,8.23e-31,67;CL:0000839,7.59e-29,66;CL:0000738,5.09e-25,136;CL:0002087,8.22e-24,115;CL:0002031,1.32e-22,120;CL:0000763,3.62e-21,108;CL:0000049,3.62e-21,108;CL:0000988,1.66e-19,177;CL:0000037,1.70e-18,168;CL:0002032,1.89e-18,161;CL:0000837,1.89e-18,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-33;42 | |ontology_enrichment_development_v019=CL:0002057;3.25e-33;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.56e-15!57;UBERON:0005068!6.56e-15!57;UBERON:0006241!6.56e-15!57;UBERON:0007135!6.56e-15!57;UBERON:0002390!8.56e-15!102;UBERON:0003061!8.56e-15!102;UBERON:0002371!2.83e-14!80;UBERON:0002193!6.42e-13!112;UBERON:0001474!7.82e-13!86;UBERON:0007023!1.37e-11!115;UBERON:0002616!1.38e-11!59;UBERON:0003080!7.65e-11!42;UBERON:0002780!2.21e-10!41;UBERON:0001890!2.21e-10!41;UBERON:0006240!2.21e-10!41;UBERON:0002405!2.84e-10!115;UBERON:0004765!4.12e-10!101;UBERON:0001434!4.12e-10!101;UBERON:0002346!8.17e-10!90;UBERON:0000955!4.90e-09!69;UBERON:0006238!4.90e-09!69;UBERON:0003075!5.85e-09!86;UBERON:0007284!5.85e-09!86;UBERON:0001017!3.76e-08!82;UBERON:0002020!4.87e-08!34;UBERON:0003528!4.87e-08!34;UBERON:0005743!6.37e-08!86;UBERON:0001893!1.50e-07!34;UBERON:0001869!2.26e-07!32;UBERON:0000073!3.05e-07!94;UBERON:0001016!3.05e-07!94;UBERON:0002791!3.25e-07!33 | |ontology_enrichment_uberon=UBERON:0001049!6.56e-15!57;UBERON:0005068!6.56e-15!57;UBERON:0006241!6.56e-15!57;UBERON:0007135!6.56e-15!57;UBERON:0002390!8.56e-15!102;UBERON:0003061!8.56e-15!102;UBERON:0002371!2.83e-14!80;UBERON:0002193!6.42e-13!112;UBERON:0001474!7.82e-13!86;UBERON:0007023!1.37e-11!115;UBERON:0002616!1.38e-11!59;UBERON:0003080!7.65e-11!42;UBERON:0002780!2.21e-10!41;UBERON:0001890!2.21e-10!41;UBERON:0006240!2.21e-10!41;UBERON:0002405!2.84e-10!115;UBERON:0004765!4.12e-10!101;UBERON:0001434!4.12e-10!101;UBERON:0002346!8.17e-10!90;UBERON:0000955!4.90e-09!69;UBERON:0006238!4.90e-09!69;UBERON:0003075!5.85e-09!86;UBERON:0007284!5.85e-09!86;UBERON:0001017!3.76e-08!82;UBERON:0002020!4.87e-08!34;UBERON:0003528!4.87e-08!34;UBERON:0005743!6.37e-08!86;UBERON:0001893!1.50e-07!34;UBERON:0001869!2.26e-07!32;UBERON:0000073!3.05e-07!94;UBERON:0001016!3.05e-07!94;UBERON:0002791!3.25e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.83e-07;2!UBERON:0002148;3.51e-07;2!UBERON:0006331;3.51e-07;2!UBERON:0009662;3.51e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002133;1.83e-07;2!UBERON:0002148;3.51e-07;2!UBERON:0006331;3.51e-07;2!UBERON:0009662;3.51e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.48e-28,76;UBERON:0001474,6.08e-26,82;UBERON:0002390,1.03e-25,98;UBERON:0003061,1.03e-25,98;UBERON:0004765,5.36e-23,90;UBERON:0002193,1.34e-22,108;UBERON:0002405,5.05e-22,93;UBERON:0001434,5.59e-20,100;UBERON:0003081,7.94e-12,203;UBERON:0002204,3.56e-09,167;UBERON:0002133,1.32e-07,2;UBERON:0002148,5.49e-07,2;UBERON:0006331,5.49e-07,2;UBERON:0009662,5.49e-07,2 | |||
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| ||
|short_description=p4@TRIM69 | |short_description=p4@TRIM69 | ||
}} | }} |
Latest revision as of 19:24, 17 September 2015
Short description: | p4@TRIM69 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM69_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000560141_5end |
EntrezGene: | TRIM69 |
HGNC: | 17857 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.43e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.43e-46 | 42 |
defensive cell | 4.06e-43 | 48 |
phagocyte | 4.06e-43 | 48 |
macrophage dendritic cell progenitor | 1.64e-34 | 61 |
monopoietic cell | 4.77e-33 | 59 |
monocyte | 4.77e-33 | 59 |
monoblast | 4.77e-33 | 59 |
promonocyte | 4.77e-33 | 59 |
myeloid leukocyte | 5.54e-33 | 72 |
granulocyte monocyte progenitor cell | 8.23e-31 | 67 |
myeloid lineage restricted progenitor cell | 7.59e-29 | 66 |
leukocyte | 5.09e-25 | 136 |
nongranular leukocyte | 8.22e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 1.32e-22 | 120 |
myeloid cell | 3.62e-21 | 108 |
common myeloid progenitor | 3.62e-21 | 108 |
hematopoietic cell | 1.66e-19 | 177 |
hematopoietic stem cell | 1.70e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.89e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.89e-18 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.48e-28 | 76 |
bone element | 6.08e-26 | 82 |
hematopoietic system | 1.03e-25 | 98 |
blood island | 1.03e-25 | 98 |
skeletal element | 5.36e-23 | 90 |
hemolymphoid system | 1.34e-22 | 108 |
immune system | 5.05e-22 | 93 |
skeletal system | 5.59e-20 | 100 |
lateral plate mesoderm | 7.94e-12 | 203 |
musculoskeletal system | 3.56e-09 | 167 |
atrioventricular valve | 1.32e-07 | 2 |
locus ceruleus | 5.49e-07 | 2 |
brainstem nucleus | 5.49e-07 | 2 |
hindbrain nucleus | 5.49e-07 | 2 |