FFCP PHASE1:Hg19::chr12:22421536..22421552,-: Difference between revisions
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|id=chr12:22421536..22421552,-
|short_description=p4@ST8SIA1
|description=CAGE_peak_4_at_ST8SIA1_5end
|association_with_transcript=0bp_to_ENST00000508924,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6489 | |EntrezGene=6489 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10869 | |HGNC=10869 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000508924,ENST00000545494_5end | |||
|cluster_id=chr12:22421536..22421552,- | |||
|coexpression_cluster_id=C89 | |||
|description=CAGE_peak_4_at_ST8SIA1_5end | |||
|id=chr12:22421536..22421552,- | |||
|ontology_enrichment_celltype=CL:0000945!7.58e-11!24;CL:0000826!7.58e-11!24;CL:0001014!2.22e-10!2;CL:0001016!2.22e-10!2;CL:0000838!2.41e-08!52;CL:0000542!3.79e-08!53;CL:0000051!3.79e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000946;7.06e-34;1!CL:0000786;7.06e-34;1!CL:0000243;8.90e-09;15!CL:0000125;8.90e-09;15!CL:0000095;5.94e-08;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,9.85e-34,1;CL:0000786,9.85e-34,1;CL:0000980,9.85e-34,1;CL:0000785,1.27e-17,2;CL:0000955,1.27e-17,2;CL:0000818,1.27e-17,2;CL:0000954,1.27e-17,2;CL:0000816,1.27e-17,2;CL:0000817,3.24e-12,3;CL:0000243,8.55e-09,15;CL:0000125,8.55e-09,15;CL:0000030,8.55e-09,15;CL:0000339,8.55e-09,15;CL:0000095,5.73e-08,17;CL:0000123,5.73e-08,17 | |||
|ontology_enrichment_development_v019=CL:0000954;1.07e-17;2!UBERON:0006238;5.10e-13;10!UBERON:0003056;2.07e-12;3!CL:0000339;8.90e-09;15 | |||
|ontology_enrichment_disease=DOID:0060058!1.47e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;3.61e-34;1!DOID:74;7.67e-18;2!DOID:3093;5.08e-12;11!DOID:5409;1.12e-09;4!DOID:1287;1.32e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,3.61e-34,1;DOID:74,7.67e-18,2;DOID:3093,4.80e-12,11;DOID:5409,1.12e-09,4;DOID:1287,1.32e-09,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;5.73e-08;5!UBERON:0005388;5.73e-08;5!UBERON:0001802;5.73e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
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| ||
|short_description=p4@ST8SIA1 | |||
}} | }} |
Latest revision as of 20:24, 17 September 2015
Short description: | p4@ST8SIA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ST8SIA1_5end |
Coexpression cluster: | C89_small_retinoblastoma_medulloblastoma_iPS_acantholytic_eye_bronchogenic |
Association with transcript: | 0bp_to_ENST00000508924, ENST00000545494_5end |
EntrezGene: | ST8SIA1 |
HGNC: | 10869 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 9.85e-34 | 1 |
plasma cell | 9.85e-34 | 1 |
plasmablast | 9.85e-34 | 1 |
mature B cell | 1.27e-17 | 2 |
pre-B-II cell | 1.27e-17 | 2 |
transitional stage B cell | 1.27e-17 | 2 |
small pre-B-II cell | 1.27e-17 | 2 |
immature B cell | 1.27e-17 | 2 |
precursor B cell | 3.24e-12 | 3 |
glial cell (sensu Vertebrata) | 8.55e-09 | 15 |
glial cell | 8.55e-09 | 15 |
glioblast | 8.55e-09 | 15 |
glioblast (sensu Vertebrata) | 8.55e-09 | 15 |
neuron associated cell | 5.73e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 5.73e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
anemia | 3.61e-34 | 1 |
hematopoietic system disease | 7.67e-18 | 2 |
nervous system cancer | 4.80e-12 | 11 |
lung small cell carcinoma | 1.12e-09 | 4 |
cardiovascular system disease | 1.32e-09 | 4 |