FFCP PHASE1:Hg19::chr7:23312902..23312968,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10457 | |EntrezGene=10457 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4462 | |HGNC=4462 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468723_5end | |association_with_transcript=0bp_to_ENST00000468723_5end | ||
|cluster_id=chr7:23312902..23312968,+ | |||
|description=CAGE_peak_2_at_GPNMB_5end | |description=CAGE_peak_2_at_GPNMB_5end | ||
|id=chr7:23312902..23312968,+ | |id=chr7:23312902..23312968,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.06e-09!254 | |ontology_enrichment_celltype=CL:0000066!5.06e-09!254 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.72e-10;24!CL:0002322;4.96e-07;5 | |ontology_enrichment_celltype_v019=CL:0000945;2.72e-10;24!CL:0002322;4.96e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.54e-10,24;CL:0000826,2.54e-10,24;CL:0000542,8.84e-08,53;CL:0000051,8.84e-08,53;CL:0002322,4.39e-07,5;CL:0000838,7.71e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.60e-14;29 | |ontology_enrichment_development_v019=UBERON:0008947;5.60e-14;29 | ||
|ontology_enrichment_disease=DOID:162!3.90e-29!235;DOID:14566!1.20e-27!239;DOID:305!2.62e-24!106;DOID:0050687!1.37e-23!143;DOID:0050686!3.98e-13!137;DOID:0050615!4.56e-07!16;DOID:3119!5.02e-07!14 | |ontology_enrichment_disease=DOID:162!3.90e-29!235;DOID:14566!1.20e-27!239;DOID:305!2.62e-24!106;DOID:0050687!1.37e-23!143;DOID:0050686!3.98e-13!137;DOID:0050615!4.56e-07!16;DOID:3119!5.02e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:0050615;1.03e-08;16!DOID:0060058;2.34e-08;10!DOID:1324;3.49e-07;15 | |ontology_enrichment_disease_v019=DOID:0050615;1.03e-08;16!DOID:0060058;2.34e-08;10!DOID:1324;3.49e-07;15 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.05e-15,235;DOID:14566,4.39e-15,239;DOID:305,8.04e-12,106;DOID:0050687,7.76e-10,143;DOID:0050686,1.31e-09,137;DOID:0050615,1.26e-08,16;DOID:0060058,1.79e-08,10;DOID:1324,4.06e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0001041!1.42e-10!98;UBERON:0004921!6.81e-10!129;UBERON:0004185!6.81e-10!129;UBERON:0000065!4.68e-09!53;UBERON:0008947!5.47e-09!38;UBERON:0003258!5.47e-09!38;UBERON:0000072!6.61e-09!46;UBERON:0000077!1.21e-08!130;UBERON:0001557!1.26e-08!19;UBERON:0001737!1.77e-08!9;UBERON:0001007!7.64e-08!155;UBERON:0001555!7.64e-08!155;UBERON:0007026!7.64e-08!155;UBERON:0004119!9.66e-07!169;UBERON:0000925!9.66e-07!169;UBERON:0006595!9.66e-07!169;UBERON:0001004!9.89e-07!72 | |ontology_enrichment_uberon=UBERON:0001041!1.42e-10!98;UBERON:0004921!6.81e-10!129;UBERON:0004185!6.81e-10!129;UBERON:0000065!4.68e-09!53;UBERON:0008947!5.47e-09!38;UBERON:0003258!5.47e-09!38;UBERON:0000072!6.61e-09!46;UBERON:0000077!1.21e-08!130;UBERON:0001557!1.26e-08!19;UBERON:0001737!1.77e-08!9;UBERON:0001007!7.64e-08!155;UBERON:0001555!7.64e-08!155;UBERON:0007026!7.64e-08!155;UBERON:0004119!9.66e-07!169;UBERON:0000925!9.66e-07!169;UBERON:0006595!9.66e-07!169;UBERON:0001004!9.89e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.43e-14;9!UBERON:0001557;9.43e-14;9!UBERON:0003296;9.00e-10;4!UBERON:0010133;9.00e-10;4!UBERON:0000072;2.67e-09;37!UBERON:0000065;2.44e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0001737;9.43e-14;9!UBERON:0001557;9.43e-14;9!UBERON:0003296;9.00e-10;4!UBERON:0010133;9.00e-10;4!UBERON:0000072;2.67e-09;37!UBERON:0000065;2.44e-07;44 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.81e-14,9;UBERON:0001557,6.73e-12,19;UBERON:0000072,2.79e-11,47;UBERON:0008947,8.11e-10,38;UBERON:0003258,8.11e-10,38;UBERON:0003296,8.36e-10,4;UBERON:0010133,8.36e-10,4;UBERON:0000065,3.14e-09,54;UBERON:0001004,3.25e-08,74;UBERON:0001041,7.67e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0,4.81404456212093,2.8735206307481,5.11620078538915,0,0,0,0,0,0,5.57763844178172,8.38798471675787,1.46800219667424,0,0,0,0,0.32389366601898,0.515151135268373,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,1.5046784585161,0,0,0,0.445641827540694,0,0,0,0.640456598628376,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.516833518338658,0.35576626268671,0.33472061276467,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,1.85541675650079,2.09149097165133,0.621966330092223,1.51392510525377,2.18986415445498,0,0,0,0,0,1.77460200059766,1.68584690078102,1.44606617930089,1.10293972732394,1.52515610864684,2.60997681022206,1.61797569792197,1.37355025587742,0.769494313892781,0,0,0,0,0,0,0.590789906681404,0,0.737930631258681,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,3.6988097517864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0.15403067420883,0,1.46139224653261,4.43316841350078,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.457847324091717,0.660075999364704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.490080431962063,9.66176510653737,0,1.42283686696828,2.55082036366116,0.399158742865633,0,0,1.62310970137278,1.12318871245384,0,2.0368386450493,0,0.338583555603207,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,1.6653598399891,0,0,0.293016358543788,0.242721043499027,1.67165076416218,0,0,0,0,0,0,0,0,0,0,0.276283915531148,13.1005028884224,0.818149460017238,2.95403533106567,0,0.179736702294654,0.716084698702437,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0.762760950878299,5.67330436243047,2.41320361269025,1.74962768029953,0,0,0,1.52581736317083,0,0.295547618953547,0,4.90223085835456,0,0,0.227884111694002,12.6810147413433,0.718061155278177,6.08425282763245,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0.335643173951685,0.189753732724185,0,0.843992258112108,0.816164040795739,0.565412285735763,1.51472047819464,0,0.0884575645033392,0,0.889563386041866,0.370691816839509,0.313265848516366,0,3.21031058919516,0,0.729819156862664,1.56531695145672,0,0,0,0,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0.277349346026277,0.694238953340524,0,0.435296032902013,1.57254001417827,0.171986032471617,0.580537987734511,0.65780385377567,0.985385484638511,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0.782205530939212,2.16428814679141,0,0.19980960958213,0.576361668616424,0,0.857974989309823,3.74542474769189,0.248505071130865,1.17847017308398,0.543616824294456,0.627617077873999,0.101998217636322,0,0,0,0,0,0.525774708558629,0,0,0,0.399358000997982,0,0,0.201550417460179,0,1.16495949527454,1.02418136999391,0.988990300573997,0.741438982396034,0.0984274815147488,5.92713324460491,0,0,0.964518890790115,0.825236619583403,1.66176135211674,0.2249738915515,0,0,0.335434687599266,0.315222829196793,0.0524545881349981,0.211200673038813,2.33073541132698,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0.146552233678082,1.32506888912221,0,0,1.02652102730598,4.9337051562167,0.106787412567695,0.314408610199332,0.414239055347196,0,5.73073732504038,9.62161527209078,0.638341257770182,0,0,0,0,5.0257310800075,0,0,0,0,0,0.0620964029413835,0.138348634936231,0.124980407962107,0,0.285465333544967,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0.168942440653073,0.256241518587947,1.0362910251936,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,3.2720846135555,0,0,0.139879507719444,0,0.127894371303652,0,0.157265941855896,0.218419276384028,0.169732529954025,0,0,0,0,0.23658523500376,28.8205469382769,0,0,0,0,0,0,0,0,0,0,0.785181748008205,1.1796972334774,0,0,0,0,0,0,0,0,2.3571602503328,0,0.443568258651136,0.0675375846183947,0,0,0,0,0,2.97726707033577,0,0.638812138197976,1.60710550763486,3.36283722218824,3.03482802118316,4.32558163567465,0.177404740325278,3.11131766400604,0.342976018874837,0.135939465953663,0,1.89110145414349,0,0,0,0.280272163313789,0,0,0,0,1.58013611732727,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.121917924982269,7.12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| ||
|short_description=p2@GPNMB | |short_description=p2@GPNMB | ||
}} | }} |
Latest revision as of 20:29, 17 September 2015
Short description: | p2@GPNMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GPNMB_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468723_5end |
EntrezGene: | GPNMB |
HGNC: | 4462 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.54e-10 | 24 |
pro-B cell | 2.54e-10 | 24 |
lymphocyte | 8.84e-08 | 53 |
common lymphoid progenitor | 8.84e-08 | 53 |
embryonic stem cell | 4.39e-07 | 5 |
lymphoid lineage restricted progenitor cell | 7.71e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.81e-14 | 9 |
upper respiratory tract | 6.73e-12 | 19 |
segment of respiratory tract | 2.79e-11 | 47 |
respiratory primordium | 8.11e-10 | 38 |
endoderm of foregut | 8.11e-10 | 38 |
gland of diencephalon | 8.36e-10 | 4 |
neuroendocrine gland | 8.36e-10 | 4 |
respiratory tract | 3.14e-09 | 54 |
respiratory system | 3.25e-08 | 74 |
foregut | 7.67e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.05e-15 | 235 |
disease of cellular proliferation | 4.39e-15 | 239 |
carcinoma | 8.04e-12 | 106 |
cell type cancer | 7.76e-10 | 143 |
organ system cancer | 1.31e-09 | 137 |
respiratory system cancer | 1.26e-08 | 16 |
lymphoma | 1.79e-08 | 10 |
lung cancer | 4.06e-07 | 15 |