FFCP PHASE1:Hg19::chr11:3829763..3829832,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27315 | |EntrezGene=27315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17893 | |HGNC=17893 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQ19,E9PKT0,E9PPF7,Q9UHJ9 | |UniProt=E9PQ19,E9PKT0,E9PPF7,Q9UHJ9 | ||
|association_with_transcript=0bp_to_ENST00000463452,ENST00000469307,ENST00000478773,ENST00000479072,ENST00000483829,ENST00000487112,ENST00000496834,ENST00000525937,NM_014489,NR_027016,uc001lys.2,uc001lyt.2_5end | |association_with_transcript=0bp_to_ENST00000463452,ENST00000469307,ENST00000478773,ENST00000479072,ENST00000483829,ENST00000487112,ENST00000496834,ENST00000525937,NM_014489,NR_027016,uc001lys.2,uc001lyt.2_5end | ||
|cluster_id=chr11:3829763..3829832,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_2_at_PGAP2_5end | |description=CAGE_peak_2_at_PGAP2_5end | ||
|id=chr11:3829763..3829832,+ | |id=chr11:3829763..3829832,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.49e-29!254;CL:0002321!1.05e-08!248;CL:0000220!3.66e-08!246;CL:0002076!1.69e-07!43;CL:0000223!3.34e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.49e-29!254;CL:0002321!1.05e-08!248;CL:0000220!3.66e-08!246;CL:0002076!1.69e-07!43;CL:0000223!3.34e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.50e-29,253;CL:0002321,8.64e-09,250;CL:0002076,4.13e-07,42;CL:0000223,7.03e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.51e-15!239;DOID:162!2.11e-15!235;DOID:305!2.58e-13!106;DOID:0050687!1.08e-11!143;DOID:1240!3.20e-11!39;DOID:8692!7.50e-10!31;DOID:2531!1.55e-09!51;DOID:0060083!1.55e-09!51;DOID:0050686!3.04e-08!137 | |ontology_enrichment_disease=DOID:14566!1.51e-15!239;DOID:162!2.11e-15!235;DOID:305!2.58e-13!106;DOID:0050687!1.08e-11!143;DOID:1240!3.20e-11!39;DOID:8692!7.50e-10!31;DOID:2531!1.55e-09!51;DOID:0060083!1.55e-09!51;DOID:0050686!3.04e-08!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.57e-09;31!DOID:1240;2.38e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.57e-15,239;DOID:162,2.20e-15,235;DOID:305,2.56e-13,106;DOID:0050687,1.09e-11,143;DOID:1240,3.18e-11,39;DOID:8692,7.46e-10,31;DOID:2531,1.54e-09,51;DOID:0060083,1.54e-09,51;DOID:0050686,3.03e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.63e-09!169;UBERON:0000925!7.63e-09!169;UBERON:0006595!7.63e-09!169;UBERON:0008947!1.08e-07!38;UBERON:0003258!1.08e-07!38;UBERON:0001737!1.19e-07!9;UBERON:0000064!1.34e-07!219;UBERON:0001004!1.54e-07!72;UBERON:0001007!3.95e-07!155;UBERON:0001555!3.95e-07!155;UBERON:0007026!3.95e-07!155;UBERON:0000072!5.31e-07!46;UBERON:0000063!6.46e-07!97 | |ontology_enrichment_uberon=UBERON:0004119!7.63e-09!169;UBERON:0000925!7.63e-09!169;UBERON:0006595!7.63e-09!169;UBERON:0008947!1.08e-07!38;UBERON:0003258!1.08e-07!38;UBERON:0001737!1.19e-07!9;UBERON:0000064!1.34e-07!219;UBERON:0001004!1.54e-07!72;UBERON:0001007!3.95e-07!155;UBERON:0001555!3.95e-07!155;UBERON:0007026!3.95e-07!155;UBERON:0000072!5.31e-07!46;UBERON:0000063!6.46e-07!97 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.08e-07;9!UBERON:0001557;1.08e-07;9!UBERON:0000072;2.20e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.05e-09,160;UBERON:0000925,5.05e-09,160;UBERON:0006595,5.05e-09,160;UBERON:0008947,1.08e-07,38;UBERON:0003258,1.08e-07,38;UBERON:0001737,1.19e-07,9;UBERON:0001004,1.43e-07,74;UBERON:0001007,2.75e-07,145;UBERON:0001555,2.75e-07,145;UBERON:0007026,2.75e-07,145;UBERON:0000072,6.25e-07,47 | |||
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| ||
|short_description=p2@PGAP2 | |short_description=p2@PGAP2 | ||
}} | }} |
Latest revision as of 22:13, 17 September 2015
Short description: | p2@PGAP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PGAP2_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_ENST00000463452, ENST00000469307, ENST00000478773, ENST00000479072, ENST00000483829, ENST00000487112, ENST00000496834, ENST00000525937, NM_014489, NR_027016, uc001lys.2, uc001lyt.2_5end |
EntrezGene: | PGAP2 |
HGNC: | 17893 |
UniProt: | E9PQ19E9PKT0E9PPF7Q9UHJ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.50e-29 | 253 |
embryonic cell | 8.64e-09 | 250 |
endo-epithelial cell | 4.13e-07 | 42 |
endodermal cell | 7.03e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.05e-09 | 160 |
endoderm | 5.05e-09 | 160 |
presumptive endoderm | 5.05e-09 | 160 |
respiratory primordium | 1.08e-07 | 38 |
endoderm of foregut | 1.08e-07 | 38 |
larynx | 1.19e-07 | 9 |
respiratory system | 1.43e-07 | 74 |
digestive system | 2.75e-07 | 145 |
digestive tract | 2.75e-07 | 145 |
primitive gut | 2.75e-07 | 145 |
segment of respiratory tract | 6.25e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.57e-15 | 239 |
cancer | 2.20e-15 | 235 |
carcinoma | 2.56e-13 | 106 |
cell type cancer | 1.09e-11 | 143 |
leukemia | 3.18e-11 | 39 |
myeloid leukemia | 7.46e-10 | 31 |
hematologic cancer | 1.54e-09 | 51 |
immune system cancer | 1.54e-09 | 51 |
organ system cancer | 3.03e-08 | 137 |