FFCP PHASE1:Hg19::chr3:3168744..3168755,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:3168744..3168755,+
|short_description=p4@TRNT1
|description=CAGE_peak_4_at_TRNT1_5end
|association_with_transcript=0bp_to_ENST00000469632_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51095 | |EntrezGene=51095 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17341 | |HGNC=17341 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469632_5end | |||
|cluster_id=chr3:3168744..3168755,+ | |||
|description=CAGE_peak_4_at_TRNT1_5end | |||
|id=chr3:3168744..3168755,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.13e-18!182;CL:0000037!3.43e-17!172;CL:0000566!3.43e-17!172;CL:0000738!1.15e-16!140;CL:0002032!2.83e-16!165;CL:0000837!2.83e-16!165;CL:0002031!1.87e-13!124;CL:0002087!1.32e-11!119;CL:0000763!4.68e-09!112;CL:0000049!4.68e-09!112;CL:0000766!4.98e-09!76;CL:0002057!8.91e-09!42;CL:0000542!7.72e-08!53;CL:0000051!7.72e-08!53;CL:0000860!1.17e-07!45;CL:0000838!1.79e-07!52;CL:0000134!2.85e-07!358;CL:0002320!6.65e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.06e-33;3!CL:0000097;3.83e-21;5!CL:0000163;5.13e-12;9!CL:0000791;5.21e-10;18!CL:0000789;5.21e-10;18!CL:0002419;5.21e-10;18!CL:0000625;1.42e-09;11!CL:0000542;5.21e-08;53!CL:0000084;2.94e-07;25!CL:0000771;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,8.46e-34,3;CL:0000825,8.46e-34,3;CL:0000097,3.71e-21,5;CL:0002028,3.71e-21,5;CL:0000738,3.51e-16,136;CL:0002031,1.18e-13,120;CL:0002032,2.31e-13,161;CL:0000837,2.31e-13,161;CL:0000037,1.01e-12,168;CL:0000838,1.14e-12,52;CL:0000542,2.05e-12,53;CL:0000051,2.05e-12,53;CL:0000163,5.04e-12,9;CL:0000988,5.70e-12,177;CL:0000791,5.21e-10,18;CL:0000789,5.21e-10,18;CL:0002420,5.21e-10,18;CL:0002419,5.21e-10,18;CL:0000790,5.21e-10,18;CL:0000625,1.65e-09,11;CL:0002087,3.77e-08,115;CL:0000084,2.94e-07,25;CL:0000827,2.94e-07,25;CL:0000766,6.98e-07,72;CL:0000771,7.61e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;5.21e-10;18!CL:0000051;5.21e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.99e-08!112;UBERON:0001474!1.27e-07!86;UBERON:0002371!1.64e-07!80;UBERON:0002390!3.49e-07!102;UBERON:0003061!3.49e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,0.767658796194425,0.464448369948228,0,0,0,0.309868802321207,0,0.293600439334847,1.10799081706375,0.200544447470142,0.651032612147555,0,0,0,0,0,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0.28769239232215,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0.272906150057846,0,0.612167784741805,0,1.27867425159808,0,0.398927315243264,0.426224750532694,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0,0.637812899895131,0.419317291016752,0.561643155732475,0.300353785683013,0.32145117339416,0,0.39783335439818,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,1.1384259382189,0,0.764546456250458,0,0,0.263384084775077,0.590129310341499,0.393010762749165,1.64481199199607,0.167186495390678,0.977766799900771,0,0,0.111410456885174,0.883817722424512,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0.113309342697566,0,0,1.01207876807801,0,0,0,0.150575119077773,0.127986611154418,0,0.236777252044017,0,1.00803371612366,1.33720097891754,1.01377082717959,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0.417989933073621,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0.366403487860815,1.31780417436063,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0,0,0.427114777637135,0,0,0.103052529238439,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0.109750285408626,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.968532774145487,3.10992173311158,2.30591925467138,3.28230326908588,0,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,1.57624608161542,1.72502059887614,1.02674429023799,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0.280660094433074,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.170093705276516,0,3.08454505380579,0,0,0,0,0,0,0.522870902049801,0.256450125116389,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0.245040215981032,0.185803175125719,0,0.142283686696828,0,0.399158742865633,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0.66614393599564,0,0.18714054040822,0.146508179271894,0,0.111443384277478,0,0.71623345421307,0,0,0,0.140669416410513,0,0.16480387422676,0,0,0.276283915531148,0.503865495708552,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.247127877893006,0.208843899010911,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.126373159256976,0.751617097072463,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0.189932387867636,0,0,0,0,0,0.114536596165916,0,0,0,0,0.271808412147228,0.104602846312333,0.203996435272644,0.288950589901519,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0,0.254019996197353,0,0,0.160753148465019,0,0,0,0.77380195455795,0,0,0,0,0.316801009558219,0.179287339332845,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0.121792598380896,0,0,0,0,0.327872630709804,0,0,0,0.3755727921195,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0.889811221596536,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0.192914038270915,0,0.256241518587947,0.690860683462397,0,0,0,0,0.163565394255844,0,0,0.211312123358627,0,0.213383459388282,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0.123935764259002,0,0.318004350653419,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.117969723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| ||
|short_description=p4@TRNT1 | |||
}} | }} |
Latest revision as of 22:47, 17 September 2015
Short description: | p4@TRNT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRNT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000469632_5end |
EntrezGene: | TRNT1 |
HGNC: | 17341 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 8.46e-34 | 3 |
pro-NK cell | 8.46e-34 | 3 |
mast cell | 3.71e-21 | 5 |
basophil mast progenitor cell | 3.71e-21 | 5 |
leukocyte | 3.51e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.18e-13 | 120 |
hematopoietic oligopotent progenitor cell | 2.31e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.31e-13 | 161 |
hematopoietic stem cell | 1.01e-12 | 168 |
lymphoid lineage restricted progenitor cell | 1.14e-12 | 52 |
lymphocyte | 2.05e-12 | 53 |
common lymphoid progenitor | 2.05e-12 | 53 |
endocrine cell | 5.04e-12 | 9 |
hematopoietic cell | 5.70e-12 | 177 |
mature alpha-beta T cell | 5.21e-10 | 18 |
alpha-beta T cell | 5.21e-10 | 18 |
immature T cell | 5.21e-10 | 18 |
mature T cell | 5.21e-10 | 18 |
immature alpha-beta T cell | 5.21e-10 | 18 |
CD8-positive, alpha-beta T cell | 1.65e-09 | 11 |
nongranular leukocyte | 3.77e-08 | 115 |
T cell | 2.94e-07 | 25 |
pro-T cell | 2.94e-07 | 25 |
myeloid leukocyte | 6.98e-07 | 72 |
eosinophil | 7.61e-07 | 2 |