FFCP PHASE1:Hg19::chr6:31683117..31683130,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=58530 | |EntrezGene=58530 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13935 | |HGNC=13935 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NDY2,O95868 | |UniProt=Q8NDY2,O95868 | ||
|association_with_transcript=-2bp_to_ENST00000375824,ENST00000375825,ENST00000479334,NM_021246,uc003nwf.1,uc003nwg.1_5end | |association_with_transcript=-2bp_to_ENST00000375824,ENST00000375825,ENST00000479334,NM_021246,uc003nwf.1,uc003nwg.1_5end | ||
|cluster_id=chr6:31683117..31683130,+ | |||
|coexpression_cluster_id=C311 | |||
|description=CAGE_peak_1_at_LY6G6D_5end | |description=CAGE_peak_1_at_LY6G6D_5end | ||
|id=chr6:31683117..31683130,+ | |id=chr6:31683117..31683130,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.60e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.47e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0005754;6.98e-21;1!UBERON:0007297;3.89e-11;2!UBERON:0003104;5.29e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;1.44e-13;14!DOID:3193;3.89e-11;2!DOID:962;3.89e-11;2!DOID:1192;7.50e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.41e-13,14;DOID:3193,4.52e-11,2;DOID:962,4.52e-11,2;DOID:1192,8.29e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0001052!1.58e-12!4;UBERON:0004907!4.14e-10!5;UBERON:0000059!9.36e-08!11;UBERON:0003056!4.32e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;4.22e-21;1!UBERON:0001052;4.92e-21;4!UBERON:0000998;6.98e-21;1!UBERON:0006868;6.98e-21;1!UBERON:0004907;4.83e-17;5!UBERON:0003714;3.89e-11;2!UBERON:0000059;2.87e-08;11!UBERON:0006947;7.50e-08;3!UBERON:0004054;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,4.68e-21,4;UBERON:0000998,6.31e-21,1;UBERON:0006868,6.31e-21,1;UBERON:0004907,4.64e-17,5;UBERON:0003714,4.52e-11,2;UBERON:0000059,2.82e-08,11;UBERON:0006947,7.26e-08,3;UBERON:0004054,7.26e-08,3 | |||
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|short_description=p1@LY6G6D | |short_description=p1@LY6G6D | ||
}} | }} |
Latest revision as of 23:23, 17 September 2015
Short description: | p1@LY6G6D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LY6G6D_5end |
Coexpression cluster: | C311_rectal_heart_choriocarcinoma_placenta_chorionic_lung_ductal |
Association with transcript: | -2bp_to_ENST00000375824, ENST00000375825, ENST00000479334, NM_021246, uc003nwf.1, uc003nwg.1_5end |
EntrezGene: | LY6G6D |
HGNC: | 13935 |
UniProt: | Q8NDY2O95868 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.47e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 4.68e-21 | 4 |
seminal vesicle | 6.31e-21 | 1 |
seminal fluid secreting gland | 6.31e-21 | 1 |
lower digestive tract | 4.64e-17 | 5 |
neural tissue | 4.52e-11 | 2 |
large intestine | 2.82e-08 | 11 |
male genital duct | 7.26e-08 | 3 |
internal male genitalia | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.41e-13 | 14 |
peripheral nerve sheath neoplasm | 4.52e-11 | 2 |
neurofibroma | 4.52e-11 | 2 |
peripheral nervous system neoplasm | 8.29e-08 | 3 |