FFCP PHASE1:Hg19::chr4:5053198..5053271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55351 | |EntrezGene=55351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14217 | |HGNC=14217 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY57 | |UniProt=Q9NY57 | ||
|association_with_transcript=29bp_to_ENST00000282908_5end | |association_with_transcript=29bp_to_ENST00000282908_5end | ||
|cluster_id=chr4:5053198..5053271,+ | |||
|description=CAGE_peak_1_at_STK32B_5end | |description=CAGE_peak_1_at_STK32B_5end | ||
|id=chr4:5053198..5053271,+ | |id=chr4:5053198..5053271,+ | ||
|ontology_enrichment_celltype=CL:0000115!9.37e-12!35;CL:0002078!1.66e-11!44;CL:0002139!3.79e-11!24;CL:0000213!3.06e-10!57;CL:0000215!3.06e-10!57;CL:0000071!3.46e-08!18;CL:0002546!3.46e-08!18;CL:0000055!1.38e-07!180;CL:0000222!6.14e-07!119;CL:1000413!6.36e-07!9 | |ontology_enrichment_celltype=CL:0000115!9.37e-12!35;CL:0002078!1.66e-11!44;CL:0002139!3.79e-11!24;CL:0000213!3.06e-10!57;CL:0000215!3.06e-10!57;CL:0000071!3.46e-08!18;CL:0002546!3.46e-08!18;CL:0000055!1.38e-07!180;CL:0000222!6.14e-07!119;CL:1000413!6.36e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;8.18e-12;24!CL:0000115;1.87e-11;36!CL:0002078;2.42e-09;45!CL:0000071;1.56e-08;18!CL:1000413;1.77e-07;9!CL:0002620;9.64e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.79e-13,36;CL:0002078,1.64e-12,45;CL:0002139,5.20e-12,24;CL:0000213,3.38e-11,58;CL:0000215,3.38e-11,58;CL:0000071,9.50e-09,18;CL:0002546,9.50e-09,18;CL:1000413,1.74e-07,9;CL:0002620,8.43e-07,23 | |||
|ontology_enrichment_development_v019=CL:0002546;1.56e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!2.49e-09!659;UBERON:0002346!1.72e-08!90;UBERON:0001986!3.46e-08!18;UBERON:0004638!3.46e-08!18;UBERON:0004852!3.46e-08!18;UBERON:0000924!7.54e-08!173;UBERON:0006601!7.54e-08!173;UBERON:0000119!9.71e-08!312;UBERON:0004111!1.75e-07!241;UBERON:0000483!2.95e-07!309;UBERON:0000487!3.51e-07!22;UBERON:0000025!4.05e-07!194;UBERON:0003075!4.41e-07!86;UBERON:0007284!4.41e-07!86;UBERON:0006914!4.49e-07!25;UBERON:0000467!5.10e-07!625;UBERON:0000153!6.03e-07!129;UBERON:0007811!6.03e-07!129;UBERON:0003915!6.36e-07!9;UBERON:0004700!6.36e-07!9;UBERON:0001917!6.36e-07!9;UBERON:0000477!7.05e-07!286;UBERON:0000480!7.84e-07!626;UBERON:0004121!9.59e-07!169 | |ontology_enrichment_uberon=UBERON:0000468!2.49e-09!659;UBERON:0002346!1.72e-08!90;UBERON:0001986!3.46e-08!18;UBERON:0004638!3.46e-08!18;UBERON:0004852!3.46e-08!18;UBERON:0000924!7.54e-08!173;UBERON:0006601!7.54e-08!173;UBERON:0000119!9.71e-08!312;UBERON:0004111!1.75e-07!241;UBERON:0000483!2.95e-07!309;UBERON:0000487!3.51e-07!22;UBERON:0000025!4.05e-07!194;UBERON:0003075!4.41e-07!86;UBERON:0007284!4.41e-07!86;UBERON:0006914!4.49e-07!25;UBERON:0000467!5.10e-07!625;UBERON:0000153!6.03e-07!129;UBERON:0007811!6.03e-07!129;UBERON:0003915!6.36e-07!9;UBERON:0004700!6.36e-07!9;UBERON:0001917!6.36e-07!9;UBERON:0000477!7.05e-07!286;UBERON:0000480!7.84e-07!626;UBERON:0004121!9.59e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.56e-08;18!UBERON:0001986;1.56e-08;18!UBERON:0004852;1.56e-08;18!UBERON:0006914;1.04e-07;25!UBERON:0000487;1.11e-07;22!UBERON:0003915;1.77e-07;9!UBERON:0004700;1.77e-07;9!UBERON:0001917;1.77e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,8.91e-09,86;UBERON:0004638,9.50e-09,18;UBERON:0001986,9.50e-09,18;UBERON:0004852,9.50e-09,18;UBERON:0006914,6.86e-08,25;UBERON:0000487,7.67e-08,22;UBERON:0004121,8.94e-08,171;UBERON:0000924,8.94e-08,171;UBERON:0006601,8.94e-08,171;UBERON:0003915,1.74e-07,9;UBERON:0004700,1.74e-07,9;UBERON:0001917,1.74e-07,9;UBERON:0010371,2.31e-07,104;UBERON:0004111,2.91e-07,240;UBERON:0003075,3.07e-07,82;UBERON:0007284,3.07e-07,82;UBERON:0010314,9.61e-07,132 | |||
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| ||
|short_description=p1@STK32B | |short_description=p1@STK32B | ||
}} | }} |
Latest revision as of 23:33, 17 September 2015
Short description: | p1@STK32B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STK32B_5end |
Coexpression cluster: | NA |
Association with transcript: | 29bp_to_ENST00000282908_5end |
EntrezGene: | STK32B |
HGNC: | 14217 |
UniProt: | Q9NY57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.79e-13 | 36 |
meso-epithelial cell | 1.64e-12 | 45 |
endothelial cell of vascular tree | 5.20e-12 | 24 |
lining cell | 3.38e-11 | 58 |
barrier cell | 3.38e-11 | 58 |
blood vessel endothelial cell | 9.50e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.50e-09 | 18 |
endothelial cell of artery | 1.74e-07 | 9 |
skin fibroblast | 8.43e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 8.91e-09 | 86 |
blood vessel endothelium | 9.50e-09 | 18 |
endothelium | 9.50e-09 | 18 |
cardiovascular system endothelium | 9.50e-09 | 18 |
squamous epithelium | 6.86e-08 | 25 |
simple squamous epithelium | 7.67e-08 | 22 |
ectoderm-derived structure | 8.94e-08 | 171 |
ectoderm | 8.94e-08 | 171 |
presumptive ectoderm | 8.94e-08 | 171 |
endothelial tube | 1.74e-07 | 9 |
arterial system endothelium | 1.74e-07 | 9 |
endothelium of artery | 1.74e-07 | 9 |
ecto-epithelium | 2.31e-07 | 104 |
anatomical conduit | 2.91e-07 | 240 |
neural plate | 3.07e-07 | 82 |
presumptive neural plate | 3.07e-07 | 82 |
structure with developmental contribution from neural crest | 9.61e-07 | 132 |