FFCP PHASE1:Hg19::chr15:50716631..50716642,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:50716631..50716642,+
|short_description=p3@USP8
|description=CAGE_peak_3_at_USP8_5end
|association_with_transcript=-2bp_to_ENST00000560982_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9101 | |EntrezGene=9101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12631 | |HGNC=12631 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000560982_5end | |||
|cluster_id=chr15:50716631..50716642,+ | |||
|description=CAGE_peak_3_at_USP8_5end | |||
|id=chr15:50716631..50716642,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.01e-32!76;CL:0000738!6.85e-32!140;CL:0000839!1.74e-27!70;CL:0000557!3.72e-27!71;CL:0000037!6.54e-27!172;CL:0000566!6.54e-27!172;CL:0002031!2.36e-26!124;CL:0000860!3.73e-26!45;CL:0002009!5.42e-26!65;CL:0002057!1.82e-25!42;CL:0002032!5.80e-25!165;CL:0000837!5.80e-25!165;CL:0002194!6.63e-25!63;CL:0000576!6.63e-25!63;CL:0000040!6.63e-25!63;CL:0000559!6.63e-25!63;CL:0000763!1.46e-24!112;CL:0000049!1.46e-24!112;CL:0002087!2.41e-23!119;CL:0000988!9.61e-23!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.48e-27;33!CL:0002057;8.48e-27;33!CL:0000576;4.31e-22;48!CL:0000473;2.27e-20;39!CL:0000234;2.27e-20;39!CL:0000766;5.38e-18;69!CL:0002087;7.90e-10;104!CL:0000738;1.48e-09;136!CL:0000763;9.28e-09;100!CL:0000094;1.52e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.41e-41,72;CL:0000738,2.20e-39,136;CL:0000557,4.90e-35,67;CL:0000839,2.90e-34,66;CL:0000860,4.17e-34,42;CL:0002057,4.17e-34,42;CL:0002031,7.32e-33,120;CL:0002009,7.37e-33,61;CL:0000473,1.76e-31,48;CL:0000234,1.76e-31,48;CL:0002194,2.19e-31,59;CL:0000576,2.19e-31,59;CL:0000040,2.19e-31,59;CL:0000559,2.19e-31,59;CL:0000037,8.75e-31,168;CL:0002087,1.80e-29,115;CL:0002032,1.01e-28,161;CL:0000837,1.01e-28,161;CL:0000988,8.67e-28,177;CL:0000763,1.69e-27,108;CL:0000049,1.69e-27,108;CL:0000094,1.76e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-24;42!CL:0000049;4.37e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.63e-21!80;UBERON:0001474!4.01e-19!86;UBERON:0002390!6.36e-19!102;UBERON:0003061!6.36e-19!102;UBERON:0002193!1.65e-17!112;UBERON:0002405!1.92e-16!115;UBERON:0004765!1.11e-15!101;UBERON:0001434!1.11e-15!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.11e-29,76;UBERON:0001474,5.92e-27,82;UBERON:0004765,9.96e-25,90;UBERON:0002390,1.18e-24,98;UBERON:0003061,1.18e-24,98;UBERON:0002405,1.37e-24,93;UBERON:0002193,2.30e-23,108;UBERON:0001434,6.42e-22,100;UBERON:0002204,4.30e-07,167 | |||
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| ||
|short_description=p3@USP8 | |||
}} | }} |
Latest revision as of 23:47, 17 September 2015
Short description: | p3@USP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_USP8_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000560982_5end |
EntrezGene: | USP8 |
HGNC: | 12631 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.41e-41 | 72 |
leukocyte | 2.20e-39 | 136 |
granulocyte monocyte progenitor cell | 4.90e-35 | 67 |
myeloid lineage restricted progenitor cell | 2.90e-34 | 66 |
classical monocyte | 4.17e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.17e-34 | 42 |
hematopoietic lineage restricted progenitor cell | 7.32e-33 | 120 |
macrophage dendritic cell progenitor | 7.37e-33 | 61 |
defensive cell | 1.76e-31 | 48 |
phagocyte | 1.76e-31 | 48 |
monopoietic cell | 2.19e-31 | 59 |
monocyte | 2.19e-31 | 59 |
monoblast | 2.19e-31 | 59 |
promonocyte | 2.19e-31 | 59 |
hematopoietic stem cell | 8.75e-31 | 168 |
nongranular leukocyte | 1.80e-29 | 115 |
hematopoietic oligopotent progenitor cell | 1.01e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.01e-28 | 161 |
hematopoietic cell | 8.67e-28 | 177 |
myeloid cell | 1.69e-27 | 108 |
common myeloid progenitor | 1.69e-27 | 108 |
granulocyte | 1.76e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.11e-29 | 76 |
bone element | 5.92e-27 | 82 |
skeletal element | 9.96e-25 | 90 |
hematopoietic system | 1.18e-24 | 98 |
blood island | 1.18e-24 | 98 |
immune system | 1.37e-24 | 93 |
hemolymphoid system | 2.30e-23 | 108 |
skeletal system | 6.42e-22 | 100 |
musculoskeletal system | 4.30e-07 | 167 |