FFCP PHASE1:Hg19::chr15:50716645..50716672,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:50716645..50716672,+ to FFCP PHASE1:Hg19::chr15:50716645..50716672,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9101 | |EntrezGene=9101 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12631 | |HGNC=12631 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560982_5end | |||
|cluster_id=chr15:50716645..50716672,+ | |||
|description=CAGE_peak_2_at_USP8_5end | |||
|id=chr15:50716645..50716672,+ | |||
|ontology_enrichment_celltype=CL:0000766!8.54e-23!76;CL:0000860!2.10e-22!45;CL:0002057!8.32e-21!42;CL:0000557!8.65e-20!71;CL:0002009!1.21e-18!65;CL:0000839!1.98e-18!70;CL:0000763!5.01e-18!112;CL:0000049!5.01e-18!112;CL:0002194!1.68e-17!63;CL:0000576!1.68e-17!63;CL:0000040!1.68e-17!63;CL:0000559!1.68e-17!63;CL:0000738!7.40e-11!140;CL:0000037!8.88e-10!172;CL:0000566!8.88e-10!172;CL:0002032!2.29e-09!165;CL:0000837!2.29e-09!165;CL:0002031!1.71e-08!124;CL:0000988!4.29e-08!182;CL:0002087!2.41e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.17e-18;33!CL:0002057;2.17e-18;33!CL:0000576;8.25e-13;48!CL:0000473;6.15e-12;39!CL:0000234;6.15e-12;39!CL:0000766;1.84e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.81e-21,72;CL:0000860,7.85e-21,42;CL:0002057,7.85e-21,42;CL:0000557,1.73e-18,67;CL:0002009,2.36e-17,61;CL:0000839,3.83e-17,66;CL:0000763,8.35e-17,108;CL:0000049,8.35e-17,108;CL:0000473,9.23e-17,48;CL:0000234,9.23e-17,48;CL:0002194,3.21e-16,59;CL:0000576,3.21e-16,59;CL:0000040,3.21e-16,59;CL:0000559,3.21e-16,59;CL:0000738,7.95e-10,136;CL:0000037,7.63e-09,168;CL:0002032,1.92e-08,161;CL:0000837,1.92e-08,161;CL:0000988,1.38e-07,177;CL:0002031,1.51e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.68e-15;42 | |||
|ontology_enrichment_disease=DOID:0050687!4.15e-17!143;DOID:305!7.83e-16!106;DOID:162!1.90e-12!235;DOID:14566!3.53e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.48e-17,143;DOID:305,8.61e-16,106;DOID:162,2.14e-12,235;DOID:14566,4.16e-11,239 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.56e-16!86;UBERON:0002371!1.73e-16!80;UBERON:0004765!3.69e-15!101;UBERON:0001434!3.69e-15!101;UBERON:0002390!6.04e-12!102;UBERON:0003061!6.04e-12!102;UBERON:0002405!1.43e-10!115;UBERON:0002193!1.65e-10!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.53e-15,82;UBERON:0002371,2.87e-15,76;UBERON:0004765,3.38e-15,90;UBERON:0001434,6.48e-14,100;UBERON:0002405,2.45e-11,93;UBERON:0002390,8.36e-11,98;UBERON:0003061,8.36e-11,98;UBERON:0002193,1.81e-09,108 | |||
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| ||
|short_description=p2@USP8 | |||
}} | }} |
Latest revision as of 23:48, 17 September 2015
Short description: | p2@USP8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000560982_5end |
EntrezGene: | USP8 |
HGNC: | 12631 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.81e-21 | 72 |
classical monocyte | 7.85e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.85e-21 | 42 |
granulocyte monocyte progenitor cell | 1.73e-18 | 67 |
macrophage dendritic cell progenitor | 2.36e-17 | 61 |
myeloid lineage restricted progenitor cell | 3.83e-17 | 66 |
myeloid cell | 8.35e-17 | 108 |
common myeloid progenitor | 8.35e-17 | 108 |
defensive cell | 9.23e-17 | 48 |
phagocyte | 9.23e-17 | 48 |
monopoietic cell | 3.21e-16 | 59 |
monocyte | 3.21e-16 | 59 |
monoblast | 3.21e-16 | 59 |
promonocyte | 3.21e-16 | 59 |
leukocyte | 7.95e-10 | 136 |
hematopoietic stem cell | 7.63e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.92e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-08 | 161 |
hematopoietic cell | 1.38e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 1.51e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.53e-15 | 82 |
bone marrow | 2.87e-15 | 76 |
skeletal element | 3.38e-15 | 90 |
skeletal system | 6.48e-14 | 100 |
immune system | 2.45e-11 | 93 |
hematopoietic system | 8.36e-11 | 98 |
blood island | 8.36e-11 | 98 |
hemolymphoid system | 1.81e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.48e-17 | 143 |
carcinoma | 8.61e-16 | 106 |
cancer | 2.14e-12 | 235 |
disease of cellular proliferation | 4.16e-11 | 239 |