FFCP PHASE1:Hg19::chr16:810945..810956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |EntrezGene=10232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |HGNC=7371 | ||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |UniProt=Q13421 | ||
|association_with_transcript=-116bp_to_NM_013404_5end | |association_with_transcript=-116bp_to_NM_013404_5end | ||
|cluster_id=chr16:810945..810956,+ | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_8_at_MSLN_5end | |description=CAGE_peak_8_at_MSLN_5end | ||
|id=chr16:810945..810956,+ | |id=chr16:810945..810956,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.58e-23!254;CL:0000077!3.82e-09!19;CL:0000349!5.62e-08!3;CL:0002577!5.62e-08!3;CL:1000507!1.42e-07!12;CL:1000494!1.42e-07!12;CL:1000449!4.59e-07!16;CL:0002178!5.07e-07!3;CL:0002681!7.75e-07!13;CL:0002584!7.75e-07!13;CL:0002150!9.24e-07!3;CL:0000861!9.24e-07!3 | |ontology_enrichment_celltype=CL:0000066!1.58e-23!254;CL:0000077!3.82e-09!19;CL:0000349!5.62e-08!3;CL:0002577!5.62e-08!3;CL:1000507!1.42e-07!12;CL:1000494!1.42e-07!12;CL:1000449!4.59e-07!16;CL:0002178!5.07e-07!3;CL:0002681!7.75e-07!13;CL:0002584!7.75e-07!13;CL:0002150!9.24e-07!3;CL:0000861!9.24e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.49e-18;19!CL:0002577;3.47e-17;3!CL:0002097;1.64e-11;2!CL:0000575;1.64e-11;2!CL:0002537;5.29e-11;5!CL:0000174;5.84e-08;3!CL:0000313;6.60e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.56e-18,19;CL:0002577,2.79e-17,3;CL:0000066,5.08e-12,253;CL:0002097,1.01e-11,2;CL:0000575,3.88e-11,2;CL:0002537,5.48e-11,5;CL:0000174,4.23e-08,3;CL:0000313,6.24e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.09e-13;29 | |||
|ontology_enrichment_disease=DOID:305!1.55e-17!106;DOID:0050687!3.14e-11!143 | |||
|ontology_enrichment_disease_v019=DOID:3493;2.60e-12;2!DOID:2152;6.60e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.13e-14,106;DOID:3493,3.17e-12,2;DOID:0050687,1.67e-09,143;DOID:2152,6.24e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.65e-19!9;UBERON:0005631!7.49e-18!14;UBERON:0000158!7.49e-18!14;UBERON:0008947!1.82e-17!38;UBERON:0003258!1.82e-17!38;UBERON:0000065!3.79e-12!53;UBERON:0000064!5.32e-11!219;UBERON:0003124!5.56e-11!7;UBERON:0001004!1.39e-10!72;UBERON:0000072!2.57e-10!46;UBERON:0000077!1.08e-09!130;UBERON:0001557!1.29e-09!19;UBERON:0001987!2.09e-09!4;UBERON:0004340!2.09e-09!4;UBERON:0000478!2.94e-09!24;UBERON:0004119!3.31e-09!169;UBERON:0000925!3.31e-09!169;UBERON:0006595!3.31e-09!169;UBERON:0001851!4.11e-09!16;UBERON:0000305!1.35e-08!7;UBERON:0001041!1.47e-08!98;UBERON:0006555!3.56e-08!17;UBERON:0005103!3.56e-08!17;UBERON:0000083!3.56e-08!17;UBERON:0009201!3.56e-08!17;UBERON:0004819!3.56e-08!17;UBERON:0006553!3.56e-08!17;UBERON:0003074!3.56e-08!17;UBERON:0003060!3.56e-08!17;UBERON:0000464!4.71e-08!104;UBERON:0000080!1.27e-07!18;UBERON:0002120!1.27e-07!18;UBERON:0004875!1.27e-07!18;UBERON:0005721!1.27e-07!18;UBERON:0005754!1.27e-07!18;UBERON:0007297!1.27e-07!18;UBERON:0009773!1.42e-07!12;UBERON:0001231!1.42e-07!12;UBERON:0004810!1.42e-07!12;UBERON:0000058!1.55e-07!26;UBERON:0004871!1.91e-07!8;UBERON:0004921!3.07e-07!129;UBERON:0004185!3.07e-07!129;UBERON:0001007!3.39e-07!155;UBERON:0001555!3.39e-07!155;UBERON:0007026!3.39e-07!155;UBERON:0004211!4.59e-07!16;UBERON:0001285!4.59e-07!16;UBERON:0007684!4.59e-07!16;UBERON:0003220!4.59e-07!16;UBERON:0004208!4.59e-07!16;UBERON:0000466!6.70e-07!126;UBERON:0001225!7.75e-07!13;UBERON:0008987!7.75e-07!13 | |ontology_enrichment_uberon=UBERON:0001737!4.65e-19!9;UBERON:0005631!7.49e-18!14;UBERON:0000158!7.49e-18!14;UBERON:0008947!1.82e-17!38;UBERON:0003258!1.82e-17!38;UBERON:0000065!3.79e-12!53;UBERON:0000064!5.32e-11!219;UBERON:0003124!5.56e-11!7;UBERON:0001004!1.39e-10!72;UBERON:0000072!2.57e-10!46;UBERON:0000077!1.08e-09!130;UBERON:0001557!1.29e-09!19;UBERON:0001987!2.09e-09!4;UBERON:0004340!2.09e-09!4;UBERON:0000478!2.94e-09!24;UBERON:0004119!3.31e-09!169;UBERON:0000925!3.31e-09!169;UBERON:0006595!3.31e-09!169;UBERON:0001851!4.11e-09!16;UBERON:0000305!1.35e-08!7;UBERON:0001041!1.47e-08!98;UBERON:0006555!3.56e-08!17;UBERON:0005103!3.56e-08!17;UBERON:0000083!3.56e-08!17;UBERON:0009201!3.56e-08!17;UBERON:0004819!3.56e-08!17;UBERON:0006553!3.56e-08!17;UBERON:0003074!3.56e-08!17;UBERON:0003060!3.56e-08!17;UBERON:0000464!4.71e-08!104;UBERON:0000080!1.27e-07!18;UBERON:0002120!1.27e-07!18;UBERON:0004875!1.27e-07!18;UBERON:0005721!1.27e-07!18;UBERON:0005754!1.27e-07!18;UBERON:0007297!1.27e-07!18;UBERON:0009773!1.42e-07!12;UBERON:0001231!1.42e-07!12;UBERON:0004810!1.42e-07!12;UBERON:0000058!1.55e-07!26;UBERON:0004871!1.91e-07!8;UBERON:0004921!3.07e-07!129;UBERON:0004185!3.07e-07!129;UBERON:0001007!3.39e-07!155;UBERON:0001555!3.39e-07!155;UBERON:0007026!3.39e-07!155;UBERON:0004211!4.59e-07!16;UBERON:0001285!4.59e-07!16;UBERON:0007684!4.59e-07!16;UBERON:0003220!4.59e-07!16;UBERON:0004208!4.59e-07!16;UBERON:0000466!6.70e-07!126;UBERON:0001225!7.75e-07!13;UBERON:0008987!7.75e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.70e-28;9!UBERON:0001557;9.70e-28;9!UBERON:0005631;3.22e-14;10!UBERON:0000158;3.22e-14;10!UBERON:0000478;7.14e-14;24!UBERON:0000305;2.56e-13;7!UBERON:0001987;5.04e-13;4!UBERON:0000065;1.34e-08;44!UBERON:0002369;5.84e-08;3!UBERON:0001235;5.84e-08;3!UBERON:0006858;5.84e-08;3!UBERON:0002294;1.04e-07;7!UBERON:0001173;1.04e-07;7!UBERON:0004911;6.60e-07;1!UBERON:0002171;6.60e-07;1!UBERON:0004913;6.60e-07;1!UBERON:0003703;6.60e-07;1!UBERON:0006518;6.60e-07;1!UBERON:0008949;6.60e-07;1!UBERON:0000101;6.60e-07;1!UBERON:0002167;6.60e-07;1!UBERON:0001174;6.60e-07;1!UBERON:0004914;6.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.27e-27,9;UBERON:0005631,9.52e-25,14;UBERON:0000158,9.52e-25,14;UBERON:0000478,6.44e-14,24;UBERON:0000305,2.41e-13,7;UBERON:0001987,4.29e-13,4;UBERON:0004340,4.29e-13,4;UBERON:0003124,4.64e-13,7;UBERON:0001557,1.18e-12,19;UBERON:0004871,1.09e-11,8;UBERON:0008947,7.77e-10,38;UBERON:0003258,7.77e-10,38;UBERON:0002369,4.23e-08,3;UBERON:0001235,4.23e-08,3;UBERON:0006858,4.23e-08,3;UBERON:0004119,4.89e-07,160;UBERON:0000925,4.89e-07,160;UBERON:0006595,4.89e-07,160;UBERON:0004913,5.26e-07,1;UBERON:0003703,5.26e-07,1;UBERON:0001174,5.26e-07,1;UBERON:0004914,5.26e-07,1;UBERON:0004911,6.24e-07,1;UBERON:0002171,8.27e-07,1;UBERON:0006518,8.27e-07,1;UBERON:0008949,8.27e-07,1;UBERON:0000101,8.27e-07,1;UBERON:0002167,8.27e-07,1 | |||
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| ||
|short_description=p8@MSLN | |short_description=p8@MSLN | ||
}} | }} |
Latest revision as of 00:31, 18 September 2015
Short description: | p8@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -116bp_to_NM_013404_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.56e-18 | 19 |
placental epithelial cell | 2.79e-17 | 3 |
epithelial cell | 5.08e-12 | 253 |
cortical cell of adrenal gland | 1.01e-11 | 2 |
corneal epithelial cell | 3.88e-11 | 2 |
amnion mesenchymal stem cell | 5.48e-11 | 5 |
steroid hormone secreting cell | 4.23e-08 | 3 |
serous secreting cell | 6.24e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.27e-27 | 9 |
extraembryonic membrane | 9.52e-25 | 14 |
membranous layer | 9.52e-25 | 14 |
extraembryonic structure | 6.44e-14 | 24 |
amnion | 2.41e-13 | 7 |
placenta | 4.29e-13 | 4 |
allantois | 4.29e-13 | 4 |
chorion | 4.64e-13 | 7 |
upper respiratory tract | 1.18e-12 | 19 |
somatic layer of lateral plate mesoderm | 1.09e-11 | 8 |
respiratory primordium | 7.77e-10 | 38 |
endoderm of foregut | 7.77e-10 | 38 |
adrenal gland | 4.23e-08 | 3 |
adrenal cortex | 4.23e-08 | 3 |
adrenal/interrenal gland | 4.23e-08 | 3 |
endoderm-derived structure | 4.89e-07 | 160 |
endoderm | 4.89e-07 | 160 |
presumptive endoderm | 4.89e-07 | 160 |
hepatopancreatic ampulla | 5.26e-07 | 1 |
extrahepatic bile duct | 5.26e-07 | 1 |
common bile duct | 5.26e-07 | 1 |
duodenal papilla | 5.26e-07 | 1 |
epithelium of female gonad | 6.24e-07 | 1 |
lower lobe of right lung | 8.27e-07 | 1 |
right lung lobe | 8.27e-07 | 1 |
lower lobe of lung | 8.27e-07 | 1 |
lobe of lung | 8.27e-07 | 1 |
right lung | 8.27e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.13e-14 | 106 |
signet ring cell adenocarcinoma | 3.17e-12 | 2 |
cell type cancer | 1.67e-09 | 143 |
ovary epithelial cancer | 6.24e-07 | 1 |