FFCP PHASE1:Hg19::chr6:31940408..31940424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8859 | |EntrezGene=8859 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11398 | |HGNC=11398 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=49bp_to_ENST00000469907_5end | |association_with_transcript=49bp_to_ENST00000469907_5end | ||
|cluster_id=chr6:31940408..31940424,+ | |||
|description=CAGE_peak_3_at_STK19_5end | |description=CAGE_peak_3_at_STK19_5end | ||
|id=chr6:31940408..31940424,+ | |id=chr6:31940408..31940424,+ | ||
|ontology_enrichment_celltype=CL:0002032!2.55e-07!165;CL:0000837!2.55e-07!165;CL:0000860!2.69e-07!45;CL:0000037!3.68e-07!172;CL:0000566!3.68e-07!172;CL:0000988!4.97e-07!182;CL:0000738!7.06e-07!140;CL:0002057!9.94e-07!42 | |ontology_enrichment_celltype=CL:0002032!2.55e-07!165;CL:0000837!2.55e-07!165;CL:0000860!2.69e-07!45;CL:0000037!3.68e-07!172;CL:0000566!3.68e-07!172;CL:0000988!4.97e-07!182;CL:0000738!7.06e-07!140;CL:0002057!9.94e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-11;33!CL:0002057;3.72e-11;33!CL:0000473;5.33e-07;39!CL:0000234;5.33e-07;39!CL:0000623;6.76e-07;3!CL:0000624;8.04e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002032,4.85e-12,161;CL:0000837,4.85e-12,161;CL:0000988,3.47e-11,177;CL:0000037,5.28e-11,168;CL:0000738,1.64e-10,136;CL:0000766,9.57e-10,72;CL:0000763,1.02e-09,108;CL:0000049,1.02e-09,108;CL:0000860,1.48e-09,42;CL:0002057,1.48e-09,42;CL:0002031,3.92e-09,120;CL:0000557,4.59e-08,67;CL:0000473,9.42e-08,48;CL:0000234,9.42e-08,48;CL:0000624,1.66e-07,6;CL:0002087,5.87e-07,115;CL:0000623,7.78e-07,3;CL:0000825,7.78e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.93e-08!239;DOID:162!4.19e-08!235 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.32e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.80e-07,8 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.96e-07,98;UBERON:0003061,2.96e-07,98;UBERON:0002371,3.43e-07,76;UBERON:0001474,5.93e-07,82 | |||
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|phase1_expression=0.181678379270557,0,0.845726424575827,1.0007329835313,0.893922188854576,0.872338524100369,0,0,0,0,0,0.436882744260345,0.791300934685361,0,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0,0,0.626909442956176,0,0.273748850145768,0.125542639594803,0.229240217243854,0,0.236132343941038,3.14691421479123,1.53531759238885,1.23852898652861,0.919421224478927,0,0.739508020333575,0.46480320348181,0.284338464974843,0,0.553995408531877,1.00272223735071,0.434021741431704,0,0,0,0.145398238779565,0.377875943688809,1.21292030593908,0.464858073811369,1.23350366406548,1.23882548358041,0.28769239232215,0.256160706529101,1.89185783910868,2.06847408441971,0,1.35426486594342,0.752969358170419,1.36453075028923,2.02251136000576,2.14258724659632,1.60464513538047,10.2293940127847,0,0.797854630486527,0,1.16083695451434,2.26954089876456,4.9825779919646,1.25624332628372,0.521482918420201,0.868755378820466,1.21079900526674,1.84138817993782,2.84816148696796,0.211255286311942,0,0.209658645508376,0.673971786878971,0,0.16072558669708,0.285012743741249,0.79566670879636,0.182664153764634,0,0,0,0.853460445133014,0.400395987036012,0,0.661044872784862,0,0,1.17447437874188,0,1.32171328579026,1.12101712596307,1.05353633910031,1.37696839079683,1.96505381374582,6.5792479679843,0.334372990781356,1.62961133316795,0,3.89653456815823,0.445641827540694,0.883817722424512,0,0.541607727530031,0.128091319725675,0.390178042679635,0.986627427622057,1.10540007114339,0,0.889719378972363,0.267540828089713,3.1360657141493,0.226618685395132,1.91610246800961,3.4362744548263,1.77113784413652,0,0.651083453856419,0,0.150575119077773,0,0,0.473554504088034,0.821127996921047,2.01606743224732,2.40696176205157,3.04131248153878,2.43806866313962,0.670700859703636,0.12786256184353,0,0,0.724232594804119,0,0.486634870302636,0,0.221729397462564,0,0.196468613246569,0,0.741568885568859,0.324547393654683,0,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0,0.694281003215189,0,1.25849830862972,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.183201743930407,3.9534125230819,7.75560528296651,1.74437620857014,0.496971951695318,0.379891534993739,1.58891016975863,2.0078563452417,0,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,0.67355336034844,0.163461903113459,0.302714855289863,0.576175924479999,0.468642863667593,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0.919463387397059,0,0.567160915800105,0.717558542755448,0.213557388818567,0.211931901159562,0.600182192168805,0,0.515281080091258,0,0.337552664482532,0.0974370051611986,1.00973509697646,0,0,0.355009592516614,0,0,0,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.674338760312407,0.964044119533928,0.330881918197182,0.653638332277218,0.474541238222193,0.943819157121151,0.392442930250692,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0.882926198829301,0.122988438543114,0.171567810298526,0.219500570817251,1.1240175325762,0.100528972411631,0,0,0,2.88662684050547,0.115930404975077,0.117408694235822,0.144366447761074,0,0.190254152234598,0.790204397959275,1.71697232418975,0,0,0.148631162288728,0,0.16798212819886,0.425325291727159,0.358234090811393,0,0,0.985326475791887,0,2.69526550203004,1.44119953416961,3.02981840223312,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0.791951872933429,0.904318131178758,0,1.29964888536674,0,0,0,0.239624855491583,0,1.42636905040718,0.579125226670317,0.205476322550383,0.179060963239896,0.448340575974109,3.54655368363469,3.01878604803324,6.03212270514817,0,0,0,0,1.27587750330633,0,0,0.414415513436035,0,1.50051156317903,0,0.831883446123229,0.356857977594324,0.946214490203608,0.234282829985426,0,2.27407504055985,0,0,0,0,0,0.343143423810856,0.82707210449155,0.862856803274467,0.320182673410333,1.5156378572313,3.32870879020994,0.30239029332968,0.744323423456331,0.306923946576125,0.280660094433074,1.02511319404561,0.511707249066704,0.64341568457443,0,0,0.177561725313127,0.164254312027618,0.519254429183621,0.116210378459959,0.846016147141356,0.40101294060657,0,0.459257792658427,0.910455840033585,0.786746489756545,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0.438519753291869,0.261435451024901,0.256450125116389,0,0,0.412164046590889,0.366277859273374,0.165018999841176,0,0,0,0.386682873168488,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0.534192213880424,0.165284915360978,0.576570202095319,0.765676274967505,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,0.308033580176089,1.06461206063404,0.869932992075073,0.55597265731176,0.858749320451947,0.372158369359667,0.316379424718726,0.762520775695299,0.255897791311334,0,1.27281299170375,0,0.179872457583315,0.274537029736055,0.706874414074119,0.606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| ||
|short_description=p3@STK19 | |short_description=p3@STK19 | ||
}} | }} |
Latest revision as of 01:26, 18 September 2015
Short description: | p3@STK19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_STK19_5end |
Coexpression cluster: | NA |
Association with transcript: | 49bp_to_ENST00000469907_5end |
EntrezGene: | STK19 |
HGNC: | 11398 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 4.85e-12 | 161 |
hematopoietic multipotent progenitor cell | 4.85e-12 | 161 |
hematopoietic cell | 3.47e-11 | 177 |
hematopoietic stem cell | 5.28e-11 | 168 |
leukocyte | 1.64e-10 | 136 |
myeloid leukocyte | 9.57e-10 | 72 |
myeloid cell | 1.02e-09 | 108 |
common myeloid progenitor | 1.02e-09 | 108 |
classical monocyte | 1.48e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.48e-09 | 42 |
hematopoietic lineage restricted progenitor cell | 3.92e-09 | 120 |
granulocyte monocyte progenitor cell | 4.59e-08 | 67 |
defensive cell | 9.42e-08 | 48 |
phagocyte | 9.42e-08 | 48 |
CD4-positive, alpha-beta T cell | 1.66e-07 | 6 |
nongranular leukocyte | 5.87e-07 | 115 |
natural killer cell | 7.78e-07 | 3 |
pro-NK cell | 7.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.96e-07 | 98 |
blood island | 2.96e-07 | 98 |
bone marrow | 3.43e-07 | 76 |
bone element | 5.93e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.80e-07 | 8 |