FFCP PHASE1:Hg19::chr5:49737460..49737482,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133418 | |EntrezGene=133418 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30465 | |HGNC=30465 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PCB8 | |UniProt=Q6PCB8 | ||
|association_with_transcript=-226bp_to_NM_198449,uc003jom.2,uc010ivr.2_5end | |association_with_transcript=-226bp_to_NM_198449,uc003jom.2,uc010ivr.2_5end | ||
|cluster_id=chr5:49737460..49737482,- | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_13_at_EMB_5end | |description=CAGE_peak_13_at_EMB_5end | ||
|id=chr5:49737460..49737482,- | |id=chr5:49737460..49737482,- | ||
|ontology_enrichment_celltype=CL:0000838!2.20e-11!52;CL:0000542!4.26e-11!53;CL:0000051!4.26e-11!53;CL:0000084!1.47e-10!25;CL:0000827!1.47e-10!25;CL:0000842!1.60e-09!3;CL:0002087!7.53e-08!119;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0000791!1.30e-07!18;CL:0000789!1.30e-07!18;CL:0002420!1.30e-07!18;CL:0002419!1.30e-07!18;CL:0000790!1.30e-07!18;CL:0000224!3.07e-07!4;CL:0000988!6.58e-07!182;CL:0000625!8.42e-07!11 | |ontology_enrichment_celltype=CL:0000838!2.20e-11!52;CL:0000542!4.26e-11!53;CL:0000051!4.26e-11!53;CL:0000084!1.47e-10!25;CL:0000827!1.47e-10!25;CL:0000842!1.60e-09!3;CL:0002087!7.53e-08!119;CL:0000037!1.09e-07!172;CL:0000566!1.09e-07!172;CL:0000791!1.30e-07!18;CL:0000789!1.30e-07!18;CL:0002420!1.30e-07!18;CL:0002419!1.30e-07!18;CL:0000790!1.30e-07!18;CL:0000224!3.07e-07!4;CL:0000988!6.58e-07!182;CL:0000625!8.42e-07!11 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!8.14e-09!51;DOID:0060083!8.14e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.12e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.89e-10,39;DOID:2531,8.60e-08,51;DOID:0060083,8.60e-08,51 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.15e-21;2!UBERON:0002757;5.15e-21;2!UBERON:0010134;5.15e-21;2!UBERON:0005408;5.15e-21;2!UBERON:0001899;5.15e-21;2!UBERON:0003296;3.26e-11;4!UBERON:0010133;3.26e-11;4!UBERON:0002784;3.26e-11;4!UBERON:0001894;5.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.593146252648242,0.802622484269139,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,1.11598390910176,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,1.22896305723383,0.894704431569664,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,7.05578038174777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,1.00885116665647,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.322944549180031,0.496597714366863,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0.276350017785848,0,0.593146252648242,0.802622484269139,0,0,0,0.34362744548263,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.403213486449465,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,1.11598390910176,0.199579371432817,0.191505370132367,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,1.22896305723383,0.894704431569664,0.667396566847634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,7.05578038174777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,1.00885116665647,0,0,0,0.115233987555779,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0.322944549180031,0.496597714366863,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p13@EMB | |short_description=p13@EMB | ||
}} | }} |
Latest revision as of 01:42, 18 September 2015
Short description: | p13@EMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_EMB_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -226bp_to_NM_198449, uc003jom.2, uc010ivr.2_5end |
EntrezGene: | EMB |
HGNC: | 30465 |
UniProt: | Q6PCB8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.89e-10 | 39 |
hematologic cancer | 8.60e-08 | 51 |
immune system cancer | 8.60e-08 | 51 |