FFCP PHASE1:Hg19::chr1:41157363..41157416,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:41157363..41157416,+ to FFCP PHASE1:Hg19::chr1:41157363..41157416,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4802 | |EntrezGene=4802 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7806 | |HGNC=7806 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUS6,Q5T6K7,F8VWM3 | |UniProt=B4DUS6,Q5T6K7,F8VWM3 | ||
|association_with_transcript=0bp_to_ENST00000425457,ENST00000447388,ENST00000453631,ENST00000456393_5end | |||
|cluster_id=chr1:41157363..41157416,+ | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_1_at_NFYC_5end | |||
|id=chr1:41157363..41157416,+ | |||
|ontology_enrichment_celltype=CL:0000763!5.75e-25!112;CL:0000049!5.75e-25!112;CL:0000037!2.56e-24!172;CL:0000566!2.56e-24!172;CL:0002032!1.56e-23!165;CL:0000837!1.56e-23!165;CL:0002057!1.79e-23!42;CL:0000988!3.18e-23!182;CL:0000557!7.27e-23!71;CL:0000766!1.06e-22!76;CL:0000860!3.72e-22!45;CL:0002009!9.32e-22!65;CL:0002194!3.91e-21!63;CL:0000576!3.91e-21!63;CL:0000040!3.91e-21!63;CL:0000559!3.91e-21!63;CL:0000839!8.19e-21!70;CL:0000738!1.49e-20!140;CL:0002031!9.11e-19!124;CL:0002087!3.84e-18!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.46e-19;33!CL:0002057;1.46e-19;33!CL:0000576;8.12e-17;48!CL:0000473;8.97e-16;39!CL:0000234;8.97e-16;39!CL:0000766;4.88e-12;69!CL:0000763;9.23e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.09e-26,108;CL:0000049,8.09e-26,108;CL:0000037,7.94e-25,168;CL:0000557,3.83e-24,67;CL:0002032,4.72e-24,161;CL:0000837,4.72e-24,161;CL:0000988,5.66e-24,177;CL:0000766,7.04e-24,72;CL:0000860,1.79e-23,42;CL:0002057,1.79e-23,42;CL:0002009,4.31e-23,61;CL:0000473,6.22e-23,48;CL:0000234,6.22e-23,48;CL:0002194,1.79e-22,59;CL:0000576,1.79e-22,59;CL:0000040,1.79e-22,59;CL:0000559,1.79e-22,59;CL:0000839,5.42e-22,66;CL:0000738,4.21e-21,136;CL:0002031,2.43e-19,120;CL:0002087,1.01e-18,115 | |||
|ontology_enrichment_development_v019=CL:0002057;4.02e-17;42!CL:0000049;1.43e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.78e-25!102;UBERON:0003061!7.78e-25!102;UBERON:0002193!3.17e-22!112;UBERON:0002371!2.34e-21!80;UBERON:0001474!2.48e-19!86;UBERON:0002405!8.25e-18!115;UBERON:0004765!4.50e-14!101;UBERON:0001434!4.50e-14!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.95e-26,98;UBERON:0003061,8.95e-26,98;UBERON:0002193,5.53e-23,108;UBERON:0002371,2.09e-22,76;UBERON:0002405,2.78e-20,93;UBERON:0001474,3.28e-20,82;UBERON:0004765,4.56e-17,90;UBERON:0001434,3.85e-14,100;UBERON:0003081,3.00e-07,203 | |||
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| ||
|short_description=p1@NFYC | |||
}} | }} |
Latest revision as of 01:49, 18 September 2015
Short description: | p1@NFYC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFYC_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | 0bp_to_ENST00000425457, ENST00000447388, ENST00000453631, ENST00000456393_5end |
EntrezGene: | NFYC |
HGNC: | 7806 |
UniProt: | B4DUS6Q5T6K7F8VWM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 8.09e-26 | 108 |
common myeloid progenitor | 8.09e-26 | 108 |
hematopoietic stem cell | 7.94e-25 | 168 |
granulocyte monocyte progenitor cell | 3.83e-24 | 67 |
hematopoietic oligopotent progenitor cell | 4.72e-24 | 161 |
hematopoietic multipotent progenitor cell | 4.72e-24 | 161 |
hematopoietic cell | 5.66e-24 | 177 |
myeloid leukocyte | 7.04e-24 | 72 |
classical monocyte | 1.79e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-23 | 42 |
macrophage dendritic cell progenitor | 4.31e-23 | 61 |
defensive cell | 6.22e-23 | 48 |
phagocyte | 6.22e-23 | 48 |
monopoietic cell | 1.79e-22 | 59 |
monocyte | 1.79e-22 | 59 |
monoblast | 1.79e-22 | 59 |
promonocyte | 1.79e-22 | 59 |
myeloid lineage restricted progenitor cell | 5.42e-22 | 66 |
leukocyte | 4.21e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.43e-19 | 120 |
nongranular leukocyte | 1.01e-18 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.95e-26 | 98 |
blood island | 8.95e-26 | 98 |
hemolymphoid system | 5.53e-23 | 108 |
bone marrow | 2.09e-22 | 76 |
immune system | 2.78e-20 | 93 |
bone element | 3.28e-20 | 82 |
skeletal element | 4.56e-17 | 90 |
skeletal system | 3.85e-14 | 100 |
lateral plate mesoderm | 3.00e-07 | 203 |