FFCP PHASE1:Hg19::chr3:37217544..37217586,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9209 | |EntrezGene=9209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6703 | |HGNC=6703 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482466_5end | |association_with_transcript=0bp_to_ENST00000482466_5end | ||
|cluster_id=chr3:37217544..37217586,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_LRRFIP2_5end | |description=CAGE_peak_6_at_LRRFIP2_5end | ||
|id=chr3:37217544..37217586,- | |id=chr3:37217544..37217586,- | ||
|ontology_enrichment_celltype=CL:0000860!7.28e-13!45;CL:0002057!1.14e-11!42;CL:0000557!9.53e-11!71;CL:0002009!1.23e-10!65;CL:0000839!9.18e-10!70;CL:0002194!1.25e-09!63;CL:0000576!1.25e-09!63;CL:0000040!1.25e-09!63;CL:0000559!1.25e-09!63;CL:0000766!8.39e-09!76 | |ontology_enrichment_celltype=CL:0000860!7.28e-13!45;CL:0002057!1.14e-11!42;CL:0000557!9.53e-11!71;CL:0002009!1.23e-10!65;CL:0000839!9.18e-10!70;CL:0002194!1.25e-09!63;CL:0000576!1.25e-09!63;CL:0000040!1.25e-09!63;CL:0000559!1.25e-09!63;CL:0000766!8.39e-09!76 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.51e-13;33!CL:0002057;4.51e-13;33!CL:0000473;1.21e-10;39!CL:0000234;1.21e-10;39!CL:0001014;1.75e-08;2!CL:0001016;1.75e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.22e-11,42;CL:0002057,5.22e-11,42;CL:0000473,7.72e-11,48;CL:0000234,7.72e-11,48;CL:0000557,1.21e-10,67;CL:0002009,1.70e-10,61;CL:0001014,1.84e-08,2;CL:0001016,1.84e-08,2;CL:0000766,2.62e-08,72;CL:0000839,4.33e-08,66;CL:0002194,4.77e-08,59;CL:0000576,4.77e-08,59;CL:0000040,4.77e-08,59;CL:0000559,4.77e-08,59;CL:0000763,6.28e-07,108;CL:0000049,6.28e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.41e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004765!2.10e-09!101;UBERON:0001434!2.10e-09!101;UBERON:0002371!2.63e-09!80;UBERON:0001474!5.78e-09!86;UBERON:0000062!3.07e-07!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.16e-09,76;UBERON:0001474,5.18e-08,82;UBERON:0004765,6.43e-08,90;UBERON:0002390,5.53e-07,98;UBERON:0003061,5.53e-07,98;UBERON:0001434,9.67e-07,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0.730310090387373,0.975865597581014,0.369363174230364,0.204000691244253,0,0,0,0,0.0764134057479513,0,0.0787107813136792,1.57345710739562,0,0.309632246632152,0.919421224478927,0.90361775633475,0.369754010166788,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.200544447470142,0.651032612147555,0,0,0.257575567634187,0.436194716338694,0,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,1.1507695692886,0.768482119587302,1.18241114944293,1.37898272294647,1.93645405075148,1.35426486594342,0.564727018627814,1.36453075028923,1.57306439111559,1.83650335422542,0.962787081228281,1.91801137739712,1.31940520074686,0.997318288108159,0.852449501065388,0.870627715885752,4.53908179752912,2.4912889959823,0.502497330513487,0.521482918420201,0.65156653411535,1.81619850790011,0.736555271975129,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0.600707571366025,0.803627933485401,0.285012743741249,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0.361439152384566,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,2.88153966094968,0,0,0,0,0.398873881556595,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,1.37559020970034,0.208994966536811,0,0.71153252537342,0.33472061276467,0.402829317109147,0,0,0.367663080345869,0,0.0892997282840798,0.22452937262617,0,0,0,0.366403487860815,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,1.14734648299525,0.709336764396714,0,0,0.24666754841716,0,0.134710672069688,0.490385709340376,0.302714855289863,0.576175924479999,0.70296429550139,0.624320153660641,1.1409436430889,0.298897361103602,0.587172493218824,0.161872944368132,0.561803226808994,0.204154171254893,0.368502951935304,0.206651562351531,0,0,0,0,0.505008341862199,0.625592599359821,0.554128230968366,0.877955241761676,0,0,0.113432183160021,1.07633781413317,0.213557388818567,0.635795703478686,1.20036438433761,0.515262646192195,0.257640540045629,0.558350568994769,0.337552664482532,0.487185025805993,0.504867548488229,0.552299391853796,0,1.77504796258307,1.10827308050404,0.339121184620975,0.57978255948989,1.09098448236334,1.43402297694502,0.243947412259191,0.132529768321485,0.116193942869518,0.414644220061482,0,0,0,0,0,0,0,0.473227200159376,0.674338760312407,0.723033089650446,0.220587945464788,0.217879444092406,0.949082476444386,0.539325232640658,0.588664395376038,0.38474715694639,0,0,0,0,2.53510069643662,0,0.590789906681404,0,0,0.171567810298526,0.658501712451753,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.234817388471643,0.144366447761074,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0.297262324577456,0.93733833986777,1.00789276919316,0.567100388969546,0.626909658919938,0.290633938513962,0.766765358330422,0,0.088048434013226,1.86595303986695,0.720599767084807,0.88369703398466,0.063497894292169,0,0,0,0.102827492703324,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,2.08014873822732,0,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.299918973546171,1.2162378064119,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0.271265023699736,0.415941723061614,0.178428988797162,0.630809660135739,0.585707074963566,0.300946099727719,0,0,0,0.184369168541703,0.60818530127658,0,0,0,0.215714200818617,0,0.303127571446259,0,0,0.496215615637554,0.460385919864187,0.841980283299221,0.896974044789907,0,0.321707842287215,1.48418066444991,0.308419387605311,0.177561725313127,0.492762936082855,0,0.464841513839837,0.241718899183244,0.802025881213139,0.644566922551274,0,0.182091168006717,0.393373244878272,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0.254876273045038,0,0,0.219259876645935,0,0,0,0.325378394664303,0.103041011647722,0.0915694648183434,0.330037999682352,0.574265537996172,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0.170453254832202,0,0.826424576804891,0.768760269460425,0.382838137483752,0.708104465988849,1.39453664789186,0.31481234683064,0.6970372701606,0,0,0.869932992075073,0.18532421910392,0.286249773483982,0,0,0,0,1.28381696410176,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0.487426979262569,1.05650146756755,0.136499911407986,0,0,0.551365343546124,0.66343897524122,0,0,0,0,0.30982349809975,0.845086807596724,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.769776901804097,0.670302275535787,2.17781969722645,0.564862804660675,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0.199579371432817,0.5745161103971,0.423347165447766,0,0,0.228234679033192,0.47003968731907,0,0.169291777801603,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0.278406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|short_description=p6@LRRFIP2 | |short_description=p6@LRRFIP2 | ||
}} | }} |
Latest revision as of 02:14, 18 September 2015
Short description: | p6@LRRFIP2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LRRFIP2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000482466_5end |
EntrezGene: | LRRFIP2 |
HGNC: | 6703 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.22e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.22e-11 | 42 |
defensive cell | 7.72e-11 | 48 |
phagocyte | 7.72e-11 | 48 |
granulocyte monocyte progenitor cell | 1.21e-10 | 67 |
macrophage dendritic cell progenitor | 1.70e-10 | 61 |
CD1a-positive Langerhans cell | 1.84e-08 | 2 |
immature CD1a-positive Langerhans cell | 1.84e-08 | 2 |
myeloid leukocyte | 2.62e-08 | 72 |
myeloid lineage restricted progenitor cell | 4.33e-08 | 66 |
monopoietic cell | 4.77e-08 | 59 |
monocyte | 4.77e-08 | 59 |
monoblast | 4.77e-08 | 59 |
promonocyte | 4.77e-08 | 59 |
myeloid cell | 6.28e-07 | 108 |
common myeloid progenitor | 6.28e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.16e-09 | 76 |
bone element | 5.18e-08 | 82 |
skeletal element | 6.43e-08 | 90 |
hematopoietic system | 5.53e-07 | 98 |
blood island | 5.53e-07 | 98 |
skeletal system | 9.67e-07 | 100 |