FFCP PHASE1:Hg19::chr6:32498087..32498098,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3127 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4953 | |||
|TSSclassifier=strong | |||
|UniProt=Q30154 | |||
|association_with_transcript=-23bp_to_ENST00000374975_5end | |||
|cluster_id=chr6:32498087..32498098,- | |||
|description=CAGE_peak_5_at_HLA-DRB5_5end | |||
|id=chr6:32498087..32498098,- | |||
|ontology_enrichment_celltype=CL:0002087!2.46e-39!119;CL:0002031!8.15e-34!124;CL:0000738!1.28e-33!140;CL:0000037!2.55e-27!172;CL:0000566!2.55e-27!172;CL:0002032!8.35e-27!165;CL:0000837!8.35e-27!165;CL:0000988!1.01e-25!182;CL:0002194!6.38e-23!63;CL:0000576!6.38e-23!63;CL:0000040!6.38e-23!63;CL:0000559!6.38e-23!63;CL:0002009!6.65e-22!65;CL:0000839!4.33e-21!70;CL:0000557!1.20e-20!71;CL:0000766!3.85e-20!76;CL:0002057!2.00e-16!42;CL:0000860!7.16e-15!45;CL:0000542!3.50e-14!53;CL:0000051!3.50e-14!53;CL:0000838!3.43e-13!52;CL:0000763!4.62e-13!112;CL:0000049!4.62e-13!112;CL:0000236!2.14e-08!14;CL:0000084!2.96e-07!25;CL:0000827!2.96e-07!25;CL:0000945!3.34e-07!24;CL:0000826!3.34e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;6.78e-21;13!CL:0000860;2.23e-12;33!CL:0002057;2.23e-12;33!CL:0000576;1.19e-11;48!CL:0000473;1.24e-11;39!CL:0000234;1.24e-11;39!CL:0002087;1.12e-10;104!CL:0000945;1.14e-10;24!CL:0000738;3.07e-10;136!CL:0000542;1.51e-09;53!CL:0000766;9.18e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,3.57e-39,115;CL:0000738,3.97e-34,136;CL:0002031,1.13e-30,120;CL:0000037,8.19e-28,168;CL:0000988,5.66e-26,177;CL:0002032,6.75e-26,161;CL:0000837,6.75e-26,161;CL:0002194,1.33e-25,59;CL:0000576,1.33e-25,59;CL:0000040,1.33e-25,59;CL:0000559,1.33e-25,59;CL:0002009,1.30e-24,61;CL:0000766,1.89e-22,72;CL:0000839,2.17e-22,66;CL:0000557,5.50e-22,67;CL:0000236,2.69e-19,14;CL:0000473,1.32e-18,48;CL:0000234,1.32e-18,48;CL:0000860,2.29e-16,42;CL:0002057,2.29e-16,42;CL:0000763,9.49e-15,108;CL:0000049,9.49e-15,108;CL:0000542,5.89e-11,53;CL:0000051,5.89e-11,53;CL:0000945,1.15e-10,24;CL:0000826,1.15e-10,24;CL:0000838,1.48e-09,52;CL:0000134,1.54e-09,354;CL:0002320,3.45e-09,361;CL:0000219,5.89e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-12;42!CL:0000051;1.51e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.18e-27!102;UBERON:0003061!1.18e-27!102;UBERON:0002193!3.89e-25!112;UBERON:0002371!1.65e-18!80;UBERON:0001474!1.73e-16!86;UBERON:0002405!3.86e-14!115;UBERON:0004765!1.54e-12!101;UBERON:0001434!1.54e-12!101;UBERON:0003081!3.07e-09!216;UBERON:0000178!1.04e-07!15;UBERON:0000179!1.04e-07!15;UBERON:0000463!1.04e-07!15;UBERON:0007023!1.22e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.66e-24,98;UBERON:0003061,7.66e-24,98;UBERON:0002193,4.64e-21,108;UBERON:0002371,7.61e-21,76;UBERON:0001474,5.95e-19,82;UBERON:0002405,8.49e-18,93;UBERON:0004765,8.06e-17,90;UBERON:0001434,1.24e-14,100;UBERON:0003081,3.47e-09,203;UBERON:0002384,1.04e-08,371;UBERON:0002204,8.15e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,14.5527155917111,0,0,0,0.154934401160603,0,0,0,3.40925560699241,0,0.447830948479849,5.50619232232265,5.40908692031792,0.145398238779565,4.1566353805769,0,0.232429036905685,7.81218987241469,0,0,5.89169625016932,0,0,1.29096936716765,0,0.376484679085209,6.00393530127261,0,0,3.53021929783703,0,0.329851300186716,7.77908264724364,0,0,3.97169657283798,0,0.502497330513487,5.73631210262222,0,0,5.15588690382591,0,0.422510572623884,6.59073329891635,0.209658645508376,0.22465726229299,4.05477610672067,0,0,2.78483348078726,0.182664153764634,7.03984977845291,12.561188059029,8.89509253863555,9.38806489646316,16.4162354684765,10.9202963591352,7.93253847341835,9.54053754535364,0,0,0,0,0,2.10707267820062,0,0,0.205601498999509,0,0,0,0,0,0,0.443067789167242,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0.34362744548263,0,0.318565414324097,0.651083453856419,1.90090408889675,0.301150238155546,0.383959833463255,0,0.710331756132051,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,1.37528029272598,0,0,2.59637914923747,2.08955684759121,0.132957960518865,6.20075623193889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,3.04205544681009,9.95828787334479,0,0,0,0,0,0,0,0,0,0,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,3.09509917629989,0,0,0,0,0,0,0,0,0,0,0,0.710246901252508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.238231775457789,0,0,0.540031437238115,1.58625035258854,0,0,0,1.48642540100575,0,0,0,0,3.83010740264733,0,0,0,0.684704037099577,0,0,0,0,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0,7.91248028370096,0,0,0.296964680832639,0,0,0,0,3.29607748453519,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0,0,0.591860433821602,2.3948309234694,0,0,0.463840490809256,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0.104421949505455,0.337005664903385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,1.00838358591705,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0.599037001496973,1.28767814440971,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12775409707835,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16470909014009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,2.46223906857616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1993571886014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687051635306701,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0.490296643507811,0,0,0,0,0,2.06764619555678,0.322289439867886,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0,0,0,0,0,0.645889098360061,0.682821857254437,0,0,0,0,0,0.404112318087525,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |||
|short_description=p5@HLA-DRB5 | |||
}} |
Latest revision as of 03:12, 18 September 2015
Short description: | p5@HLA-DRB5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HLA-DRB5_5end |
Coexpression cluster: | NA |
Association with transcript: | -23bp_to_ENST00000374975_5end |
EntrezGene: | HLA-DRB5 |
HGNC: | 4953 |
UniProt: | Q30154 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.66e-24 | 98 |
blood island | 7.66e-24 | 98 |
hemolymphoid system | 4.64e-21 | 108 |
bone marrow | 7.61e-21 | 76 |
bone element | 5.95e-19 | 82 |
immune system | 8.49e-18 | 93 |
skeletal element | 8.06e-17 | 90 |
skeletal system | 1.24e-14 | 100 |
lateral plate mesoderm | 3.47e-09 | 203 |
connective tissue | 1.04e-08 | 371 |
musculoskeletal system | 8.15e-07 | 167 |