FFCP PHASE1:Hg19::chr16:84273612..84273622,-: Difference between revisions
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|id=chr16:84273612..84273622,-
|short_description=p1@KCNG4
|description=CAGE_peak_1_at_KCNG4_5end
|association_with_transcript=-256bp_to_NM_172347,uc002fhu.1,uc010v...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93107 | |EntrezGene=93107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19697 | |HGNC=19697 | ||
|TSSclassifier=strong | |||
|UniProt=Q32MC1,Q547S7,Q8TDN1 | |UniProt=Q32MC1,Q547S7,Q8TDN1 | ||
|association_with_transcript=-256bp_to_NM_172347,uc002fhu.1,uc010voc.1_5end | |||
|cluster_id=chr16:84273612..84273622,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_KCNG4_5end | |||
|id=chr16:84273612..84273622,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;6.53e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0000966,1.17e-33,6;UBERON:0005388,1.17e-33,6;UBERON:0001802,1.17e-33,6;UBERON:0000970,5.49e-22,21;UBERON:0002104,5.49e-22,21;UBERON:0000020,2.27e-19,24;UBERON:0001032,2.27e-19,24;UBERON:0004456,2.27e-19,24;UBERON:0000019,6.30e-11,20;UBERON:0000047,6.30e-11,20;UBERON:0010312,6.30e-11,20;UBERON:0004088,6.30e-11,20;UBERON:0010230,6.30e-11,20;UBERON:0003072,6.30e-11,20;UBERON:0004128,6.30e-11,20;UBERON:0003071,6.30e-11,20;UBERON:0001456,4.96e-10,22;UBERON:0005085,2.05e-07,31 | |||
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|short_description=p1@KCNG4 | |||
}} | }} |
Latest revision as of 03:29, 18 September 2015
Short description: | p1@KCNG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KCNG4_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -256bp_to_NM_172347, uc002fhu.1, uc010voc.1_5end |
EntrezGene: | KCNG4 |
HGNC: | 19697 |
UniProt: | Q32MC1Q547S7Q8TDN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 1.17e-33 | 6 |
photoreceptor array | 1.17e-33 | 6 |
posterior segment of eyeball | 1.17e-33 | 6 |
eye | 5.49e-22 | 21 |
visual system | 5.49e-22 | 21 |
sense organ | 2.27e-19 | 24 |
sensory system | 2.27e-19 | 24 |
entire sense organ system | 2.27e-19 | 24 |
camera-type eye | 6.30e-11 | 20 |
simple eye | 6.30e-11 | 20 |
immature eye | 6.30e-11 | 20 |
ocular region | 6.30e-11 | 20 |
eyeball of camera-type eye | 6.30e-11 | 20 |
optic cup | 6.30e-11 | 20 |
optic vesicle | 6.30e-11 | 20 |
eye primordium | 6.30e-11 | 20 |
face | 4.96e-10 | 22 |
ectodermal placode | 2.05e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |