FFCP PHASE1:Hg19::chr17:78120861..78120872,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9775 | |EntrezGene=9775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18683 | |HGNC=18683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_uc010wuc.1_5end | |association_with_transcript=-10bp_to_uc010wuc.1_5end | ||
|cluster_id=chr17:78120861..78120872,- | |||
|description=CAGE_peak_5_at_EIF4A3_5end | |description=CAGE_peak_5_at_EIF4A3_5end | ||
|id=chr17:78120861..78120872,- | |id=chr17:78120861..78120872,- | ||
|ontology_enrichment_celltype=CL:0000860;9.25e-13;33!CL:0002057;9.25e-13;33!CL:0000473;2.15e-09;39!CL:0000234;2.15e-09;39 | |ontology_enrichment_celltype=CL:0002031!1.04e-14!124;CL:0000037!1.82e-14!172;CL:0000566!1.82e-14!172;CL:0002032!4.92e-14!165;CL:0000837!4.92e-14!165;CL:0000738!7.68e-14!140;CL:0000988!5.99e-13!182;CL:0002087!7.47e-12!119;CL:0000063!1.98e-11!578;CL:0000548!1.45e-10!679;CL:0000004!1.45e-10!679;CL:0000255!1.45e-10!679;CL:0000557!5.66e-10!71;CL:0000012!5.91e-10!682;CL:0000839!2.12e-09!70;CL:0000860!4.12e-09!45;CL:0000766!5.15e-09!76;CL:0000763!5.71e-09!112;CL:0000049!5.71e-09!112;CL:0002009!1.11e-08!65;CL:0002194!4.91e-08!63;CL:0000576!4.91e-08!63;CL:0000040!4.91e-08!63;CL:0000559!4.91e-08!63;CL:0002057!9.22e-08!42;CL:0000003!1.95e-07!722;CL:0000066!4.72e-07!254 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;9.25e-13;33!CL:0002057;9.25e-13;33!CL:0000473;2.15e-09;39!CL:0000234;2.15e-09;39 | ||
|ontology_enrichment_disease= | |ontology_enrichment_celltype_v019_2=CL:0000738,1.43e-17,136;CL:0002031,2.73e-17,120;CL:0000037,3.85e-17,168;CL:0002032,8.14e-17,161;CL:0000837,8.14e-17,161;CL:0000988,3.02e-16,177;CL:0002087,4.97e-14,115;CL:0000557,6.42e-11,67;CL:0000766,1.11e-10,72;CL:0000839,3.46e-10,66;CL:0000860,3.63e-10,42;CL:0002057,3.63e-10,42;CL:0000763,3.89e-10,108;CL:0000049,3.89e-10,108;CL:0002009,1.33e-09,61;CL:0000473,4.37e-09,48;CL:0000234,4.37e-09,48;CL:0002194,9.12e-09,59;CL:0000576,9.12e-09,59;CL:0000040,9.12e-09,59;CL:0000559,9.12e-09,59;CL:0000542,4.18e-07,53;CL:0000051,4.18e-07,53;CL:0000838,5.92e-07,52 | ||
|ontology_enrichment_uberon= | |ontology_enrichment_development_v019=CL:0002057;9.07e-08;42 | ||
|ontology_enrichment_disease=DOID:305!2.47e-17!106;DOID:162!4.09e-17!235;DOID:14566!1.22e-15!239;DOID:0050687!4.84e-14!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.11e-15,106;DOID:162,6.92e-11,235;DOID:14566,5.11e-10,239;DOID:0050687,1.84e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0002371!6.92e-09!80;UBERON:0001474!8.86e-09!86;UBERON:0004765!3.19e-07!101;UBERON:0001434!3.19e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.04e-09,76;UBERON:0001474,1.58e-08,82;UBERON:0004765,1.22e-07,90;UBERON:0001737,2.02e-07,9;UBERON:0002405,2.66e-07,93;UBERON:0002390,7.51e-07,98;UBERON:0003061,7.51e-07,98;UBERON:0001557,9.70e-07,19 | |||
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| ||
|short_description=p5@EIF4A3 | |short_description=p5@EIF4A3 | ||
}} | }} |
Latest revision as of 03:30, 18 September 2015
Short description: | p5@EIF4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_EIF4A3_5end |
Coexpression cluster: | NA |
Association with transcript: | -10bp_to_uc010wuc.1_5end |
EntrezGene: | EIF4A3 |
HGNC: | 18683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.43e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.73e-17 | 120 |
hematopoietic stem cell | 3.85e-17 | 168 |
hematopoietic oligopotent progenitor cell | 8.14e-17 | 161 |
hematopoietic multipotent progenitor cell | 8.14e-17 | 161 |
hematopoietic cell | 3.02e-16 | 177 |
nongranular leukocyte | 4.97e-14 | 115 |
granulocyte monocyte progenitor cell | 6.42e-11 | 67 |
myeloid leukocyte | 1.11e-10 | 72 |
myeloid lineage restricted progenitor cell | 3.46e-10 | 66 |
classical monocyte | 3.63e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.63e-10 | 42 |
myeloid cell | 3.89e-10 | 108 |
common myeloid progenitor | 3.89e-10 | 108 |
macrophage dendritic cell progenitor | 1.33e-09 | 61 |
defensive cell | 4.37e-09 | 48 |
phagocyte | 4.37e-09 | 48 |
monopoietic cell | 9.12e-09 | 59 |
monocyte | 9.12e-09 | 59 |
monoblast | 9.12e-09 | 59 |
promonocyte | 9.12e-09 | 59 |
lymphocyte | 4.18e-07 | 53 |
common lymphoid progenitor | 4.18e-07 | 53 |
lymphoid lineage restricted progenitor cell | 5.92e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.04e-09 | 76 |
bone element | 1.58e-08 | 82 |
skeletal element | 1.22e-07 | 90 |
larynx | 2.02e-07 | 9 |
immune system | 2.66e-07 | 93 |
hematopoietic system | 7.51e-07 | 98 |
blood island | 7.51e-07 | 98 |
upper respiratory tract | 9.70e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.11e-15 | 106 |
cancer | 6.92e-11 | 235 |
disease of cellular proliferation | 5.11e-10 | 239 |
cell type cancer | 1.84e-09 | 143 |