FFCP PHASE1:Hg19::chr17:78120917..78120934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9775 | |EntrezGene=9775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18683 | |HGNC=18683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_uc002jxs.2_5end | |association_with_transcript=3bp_to_uc002jxs.2_5end | ||
|cluster_id=chr17:78120917..78120934,- | |||
|description=CAGE_peak_3_at_EIF4A3_5end | |description=CAGE_peak_3_at_EIF4A3_5end | ||
|id=chr17:78120917..78120934,- | |id=chr17:78120917..78120934,- | ||
|ontology_enrichment_celltype=CL:0000037!1.22e-17!172;CL:0000566!1.22e-17!172;CL:0002032!8.51e-17!165;CL:0000837!8.51e-17!165;CL:0000012!1.88e-16!682;CL:0000548!2.08e-16!679;CL:0000004!2.08e-16!679;CL:0000255!2.08e-16!679;CL:0000063!2.50e-16!578;CL:0000738!2.46e-15!140;CL:0000988!2.77e-15!182;CL:0002031!4.43e-14!124;CL:0000763!1.36e-13!112;CL:0000049!1.36e-13!112;CL:0000766!7.62e-13!76;CL:0000557!4.02e-12!71;CL:0002087!1.15e-11!119;CL:0000860!3.77e-11!45;CL:0000839!4.08e-11!70;CL:0002009!2.21e-10!65;CL:0002057!8.23e-10!42;CL:0002194!1.07e-09!63;CL:0000576!1.07e-09!63;CL:0000040!1.07e-09!63;CL:0000559!1.07e-09!63;CL:0000003!1.71e-09!722;CL:0000066!4.20e-07!254 | |ontology_enrichment_celltype=CL:0000037!1.22e-17!172;CL:0000566!1.22e-17!172;CL:0002032!8.51e-17!165;CL:0000837!8.51e-17!165;CL:0000012!1.88e-16!682;CL:0000548!2.08e-16!679;CL:0000004!2.08e-16!679;CL:0000255!2.08e-16!679;CL:0000063!2.50e-16!578;CL:0000738!2.46e-15!140;CL:0000988!2.77e-15!182;CL:0002031!4.43e-14!124;CL:0000763!1.36e-13!112;CL:0000049!1.36e-13!112;CL:0000766!7.62e-13!76;CL:0000557!4.02e-12!71;CL:0002087!1.15e-11!119;CL:0000860!3.77e-11!45;CL:0000839!4.08e-11!70;CL:0002009!2.21e-10!65;CL:0002057!8.23e-10!42;CL:0002194!1.07e-09!63;CL:0000576!1.07e-09!63;CL:0000040!1.07e-09!63;CL:0000559!1.07e-09!63;CL:0000003!1.71e-09!722;CL:0000066!4.20e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.71e-13;33!CL:0002057;1.71e-13;33!CL:0000473;9.37e-09;39!CL:0000234;9.37e-09;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.64e-17,168;CL:0002032,5.86e-16,161;CL:0000837,5.86e-16,161;CL:0000988,7.24e-15,177;CL:0000738,1.64e-14,136;CL:0002031,2.84e-13,120;CL:0000763,8.71e-13,108;CL:0000049,8.71e-13,108;CL:0000766,5.00e-12,72;CL:0000557,2.59e-11,67;CL:0002087,6.60e-11,115;CL:0000839,2.55e-10,66;CL:0000860,8.23e-10,42;CL:0002057,8.23e-10,42;CL:0002009,1.36e-09,61;CL:0002194,6.43e-09,59;CL:0000576,6.43e-09,59;CL:0000040,6.43e-09,59;CL:0000559,6.43e-09,59;CL:0000473,9.22e-08,48;CL:0000234,9.22e-08,48;CL:0000066,3.81e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002057;6.13e-08;42 | |||
|ontology_enrichment_disease=DOID:162!7.44e-30!235;DOID:14566!9.79e-30!239;DOID:305!2.94e-25!106;DOID:0050687!3.23e-22!143;DOID:0050686!8.26e-13!137;DOID:2531!2.23e-07!51;DOID:0060083!2.23e-07!51 | |ontology_enrichment_disease=DOID:162!7.44e-30!235;DOID:14566!9.79e-30!239;DOID:305!2.94e-25!106;DOID:0050687!3.23e-22!143;DOID:0050686!8.26e-13!137;DOID:2531!2.23e-07!51;DOID:0060083!2.23e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:305;2.82e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.44e-30,235;DOID:14566,9.79e-30,239;DOID:305,2.93e-25,106;DOID:0050687,3.23e-22,143;DOID:0050686,8.26e-13,137;DOID:2531,2.23e-07,51;DOID:0060083,2.23e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001474!7.65e-11!86;UBERON:0002371!1.20e-10!80;UBERON:0004765!4.25e-09!101;UBERON:0001434!4.25e-09!101;UBERON:0002390!3.78e-08!102;UBERON:0003061!3.78e-08!102;UBERON:0002405!1.18e-07!115 | |ontology_enrichment_uberon=UBERON:0001474!7.65e-11!86;UBERON:0002371!1.20e-10!80;UBERON:0004765!4.25e-09!101;UBERON:0001434!4.25e-09!101;UBERON:0002390!3.78e-08!102;UBERON:0003061!3.78e-08!102;UBERON:0002405!1.18e-07!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.56e-10,82;UBERON:0002371,7.21e-10,76;UBERON:0004765,1.35e-08,90;UBERON:0002405,1.60e-08,93;UBERON:0001434,6.58e-08,100;UBERON:0002390,1.79e-07,98;UBERON:0003061,1.79e-07,98 | |||
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| ||
|short_description=p3@EIF4A3 | |short_description=p3@EIF4A3 | ||
}} | }} |
Latest revision as of 03:32, 18 September 2015
Short description: | p3@EIF4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EIF4A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_uc002jxs.2_5end |
EntrezGene: | EIF4A3 |
HGNC: | 18683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.64e-17 | 168 |
hematopoietic oligopotent progenitor cell | 5.86e-16 | 161 |
hematopoietic multipotent progenitor cell | 5.86e-16 | 161 |
hematopoietic cell | 7.24e-15 | 177 |
leukocyte | 1.64e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 2.84e-13 | 120 |
myeloid cell | 8.71e-13 | 108 |
common myeloid progenitor | 8.71e-13 | 108 |
myeloid leukocyte | 5.00e-12 | 72 |
granulocyte monocyte progenitor cell | 2.59e-11 | 67 |
nongranular leukocyte | 6.60e-11 | 115 |
myeloid lineage restricted progenitor cell | 2.55e-10 | 66 |
classical monocyte | 8.23e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.23e-10 | 42 |
macrophage dendritic cell progenitor | 1.36e-09 | 61 |
monopoietic cell | 6.43e-09 | 59 |
monocyte | 6.43e-09 | 59 |
monoblast | 6.43e-09 | 59 |
promonocyte | 6.43e-09 | 59 |
defensive cell | 9.22e-08 | 48 |
phagocyte | 9.22e-08 | 48 |
epithelial cell | 3.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.56e-10 | 82 |
bone marrow | 7.21e-10 | 76 |
skeletal element | 1.35e-08 | 90 |
immune system | 1.60e-08 | 93 |
skeletal system | 6.58e-08 | 100 |
hematopoietic system | 1.79e-07 | 98 |
blood island | 1.79e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.44e-30 | 235 |
disease of cellular proliferation | 9.79e-30 | 239 |
carcinoma | 2.93e-25 | 106 |
cell type cancer | 3.23e-22 | 143 |
organ system cancer | 8.26e-13 | 137 |
hematologic cancer | 2.23e-07 | 51 |
immune system cancer | 2.23e-07 | 51 |