FFCP PHASE1:Hg19::chr3:39230861..39230875,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=165904 | |EntrezGene=165904 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=14301 | |HGNC=14301 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_BC172374_5end | |association_with_transcript=60bp_to_BC172374_5end | ||
|cluster_id=chr3:39230861..39230875,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_3_at_XIRP1_5end | |description=CAGE_peak_3_at_XIRP1_5end | ||
|id=chr3:39230861..39230875,- | |id=chr3:39230861..39230875,- | ||
|ontology_enrichment_celltype=CL:0000188!1.74e-07!9 | |ontology_enrichment_celltype=CL:0000188!1.74e-07!9 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.15e-29;1!UBERON:0010226;2.73e-29;1!UBERON:0005062;2.35e-08;4!UBERON:0007284;2.35e-08;4 | |||
|ontology_enrichment_disease=DOID:114!8.04e-16!2;DOID:178!8.78e-09!1;DOID:326!8.78e-09!1;DOID:3978!8.78e-09!1;DOID:3394!8.78e-09!1;DOID:5844!8.78e-09!1;DOID:1287!2.38e-08!4 | |ontology_enrichment_disease=DOID:114!8.04e-16!2;DOID:178!8.78e-09!1;DOID:326!8.78e-09!1;DOID:3978!8.78e-09!1;DOID:3394!8.78e-09!1;DOID:5844!8.78e-09!1;DOID:1287!2.38e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:178;2.73e-29;1!DOID:326;2.73e-29;1!DOID:3978;2.73e-29;1!DOID:3394;2.73e-29;1!DOID:5844;2.73e-29;1!DOID:114;2.21e-15;2!DOID:1287;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,4.20e-29,1;DOID:326,4.20e-29,1;DOID:3978,4.20e-29,1;DOID:3394,4.20e-29,1;DOID:5844,4.20e-29,1;DOID:114,2.74e-15,2;DOID:1287,2.61e-08,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004151;3.19e-38;3!UBERON:0002084;2.73e-29;1!UBERON:0002134;2.73e-29;1!UBERON:0002426;2.73e-29;1!UBERON:0003831;2.73e-29;1!UBERON:0003898;2.73e-29;1!UBERON:0004830;2.73e-29;1!UBERON:0002082;2.73e-29;1!UBERON:0005208;2.73e-29;1!UBERON:0003830;2.73e-29;1!UBERON:0005175;2.73e-29;1!UBERON:0001774;2.73e-29;1!UBERON:0004145;2.73e-29;1!UBERON:0005946;2.73e-29;1!UBERON:0001103;2.73e-29;1!UBERON:0005965;2.73e-29;1!UBERON:0002078;2.73e-29;1!UBERON:0007100;1.57e-18;25!UBERON:0005090;2.21e-15;2!UBERON:0001630;2.21e-15;2!UBERON:0002081;2.21e-15;2!UBERON:0002133;2.21e-15;2!UBERON:0003978;1.04e-10;3!UBERON:0000946;1.04e-10;3!UBERON:0001134;4.34e-08;16!UBERON:0002036;4.34e-08;16 | |||
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|short_description=p3@XIRP1 | |short_description=p3@XIRP1 | ||
}} | }} |
Latest revision as of 03:48, 18 September 2015
Short description: | p3@XIRP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_XIRP1_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 60bp_to_BC172374_5end |
EntrezGene: | XIRP1 |
HGNC: | 14301 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.64e-38 | 3 |
heart left ventricle | 1.78e-29 | 1 |
cardiac ventricle | 1.78e-29 | 1 |
future cardiac ventricle | 1.78e-29 | 1 |
chest muscle | 2.37e-29 | 1 |
respiratory system muscle | 2.37e-29 | 1 |
skeletal muscle of trunk | 2.37e-29 | 1 |
respiratory system skeletal muscle | 2.37e-29 | 1 |
thoracic segment muscle | 2.37e-29 | 1 |
chest organ | 2.37e-29 | 1 |
muscle of trunk | 2.37e-29 | 1 |
diaphragm | 2.37e-29 | 1 |
future diaphragm | 2.37e-29 | 1 |
tricuspid valve | 3.16e-29 | 1 |
right atrium valve | 3.16e-29 | 1 |
outflow tract of atrium | 3.16e-29 | 1 |
outflow part of right atrium | 3.16e-29 | 1 |
right cardiac atrium | 3.16e-29 | 1 |
primary circulatory organ | 3.48e-17 | 27 |
muscle structure | 2.05e-15 | 2 |
muscle organ | 2.05e-15 | 2 |
cardiac atrium | 2.37e-15 | 2 |
atrioventricular valve | 2.37e-15 | 2 |
future cardiac atrium | 2.37e-15 | 2 |
valve | 1.09e-10 | 3 |
cardiac mesenchyme | 1.09e-10 | 3 |
cardial valve | 1.09e-10 | 3 |
tunica intima | 1.09e-10 | 3 |
heart layer | 1.09e-10 | 3 |
outflow tract | 1.09e-10 | 3 |
endocardium | 1.09e-10 | 3 |
endocardial cushion | 1.09e-10 | 3 |
presumptive endocardium | 1.09e-10 | 3 |
compound organ | 4.13e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.20e-29 | 1 |
ischemia | 4.20e-29 | 1 |
extrinsic cardiomyopathy | 4.20e-29 | 1 |
myocardial ischemia | 4.20e-29 | 1 |
myocardial infarction | 4.20e-29 | 1 |
heart disease | 2.74e-15 | 2 |
cardiovascular system disease | 2.61e-08 | 4 |