FFCP PHASE1:Hg19::chr21:34638904..34638917,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr21:34638904..34638917,-
|short_description=p4@LOC100288432
|description=CAGE_peak_4_at_LOC100288432_5end
|association_with_transcript=-339bp_to_ENST000004119...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100288432 | |EntrezGene=100288432 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-339bp_to_ENST00000411998,NR_038974,uc002yrj.1_5end | |||
|cluster_id=chr21:34638904..34638917,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_4_at_LOC100288432_5end | |||
|id=chr21:34638904..34638917,- | |||
|ontology_enrichment_celltype=CL:0002057!1.55e-60!42;CL:0000860!5.31e-56!45;CL:0000766!4.98e-52!76;CL:0002009!1.62e-44!65;CL:0002194!4.72e-43!63;CL:0000576!4.72e-43!63;CL:0000040!4.72e-43!63;CL:0000559!4.72e-43!63;CL:0000557!6.76e-43!71;CL:0000738!1.12e-41!140;CL:0000839!9.71e-41!70;CL:0000763!4.36e-39!112;CL:0000049!4.36e-39!112;CL:0000037!1.34e-35!172;CL:0000566!1.34e-35!172;CL:0002087!3.37e-34!119;CL:0000988!4.62e-33!182;CL:0002032!5.64e-32!165;CL:0000837!5.64e-32!165;CL:0002031!2.57e-30!124;CL:0000134!6.06e-15!358;CL:0002393!1.01e-14!9;CL:0002397!1.01e-14!9;CL:0002320!1.93e-14!365;CL:0000219!1.77e-13!390;CL:0000094!1.33e-11!8;CL:0000842!2.81e-11!3;CL:0000048!1.49e-10!430;CL:0000723!2.99e-10!436;CL:0000034!7.30e-10!444;CL:0000771!7.11e-09!2;CL:0000224!1.46e-08!4;CL:0000081!2.48e-08!11;CL:0000063!3.74e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.22e-48;6!CL:0002397;1.22e-48;6!CL:0000771;3.94e-37;2!CL:0000094;6.32e-21;8!CL:0000081;2.04e-15;11!CL:0000766;3.92e-13;69!CL:0000576;5.42e-11;48!CL:0000875;2.97e-07;3!CL:0000767;2.97e-07;3!CL:0002396;2.97e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,4.60e-50,9;CL:0002397,4.60e-50,9;CL:0000771,3.94e-37,2;CL:0000766,4.56e-24,72;CL:0000094,5.52e-21,8;CL:0000860,1.02e-20,42;CL:0002057,1.02e-20,42;CL:0000473,4.23e-18,48;CL:0000234,4.23e-18,48;CL:0000763,6.17e-16,108;CL:0000049,6.17e-16,108;CL:0000081,1.85e-15,11;CL:0000738,2.78e-15,136;CL:0002194,1.99e-14,59;CL:0000576,1.99e-14,59;CL:0000040,1.99e-14,59;CL:0000559,1.99e-14,59;CL:0002009,5.93e-14,61;CL:0000839,6.86e-13,66;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000557,1.07e-12,67;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0002087,1.77e-09,115;CL:0002031,4.59e-09,120;CL:0000767,2.63e-07,3;CL:0000875,2.97e-07,3;CL:0002396,2.97e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.29e-37!80;UBERON:0001474!4.49e-34!86;UBERON:0002390!7.25e-34!102;UBERON:0003061!7.25e-34!102;UBERON:0002193!4.36e-30!112;UBERON:0004765!7.43e-28!101;UBERON:0001434!7.43e-28!101;UBERON:0002405!3.51e-25!115;UBERON:0002384!1.30e-14!375;UBERON:0002204!9.01e-14!167;UBERON:0003081!1.84e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.57e-11,76;UBERON:0001474,2.43e-10,82;UBERON:0004765,2.12e-09,90;UBERON:0002405,4.35e-09,93;UBERON:0002390,1.31e-08,98;UBERON:0003061,1.31e-08,98;UBERON:0001434,1.97e-08,100;UBERON:0002193,8.78e-08,108 | |||
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| ||
|short_description=p4@LOC100288432 | |||
}} | }} |
Latest revision as of 04:03, 18 September 2015
Short description: | p4@LOC100288432 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LOC100288432_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -339bp_to_ENST00000411998, NR_038974, uc002yrj.1_5end |
EntrezGene: | LOC100288432 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 4.60e-50 | 9 |
CD14-positive, CD16-positive monocyte | 4.60e-50 | 9 |
eosinophil | 3.94e-37 | 2 |
myeloid leukocyte | 4.56e-24 | 72 |
granulocyte | 5.52e-21 | 8 |
classical monocyte | 1.02e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-20 | 42 |
defensive cell | 4.23e-18 | 48 |
phagocyte | 4.23e-18 | 48 |
myeloid cell | 6.17e-16 | 108 |
common myeloid progenitor | 6.17e-16 | 108 |
blood cell | 1.85e-15 | 11 |
leukocyte | 2.78e-15 | 136 |
monopoietic cell | 1.99e-14 | 59 |
monocyte | 1.99e-14 | 59 |
monoblast | 1.99e-14 | 59 |
promonocyte | 1.99e-14 | 59 |
macrophage dendritic cell progenitor | 5.93e-14 | 61 |
myeloid lineage restricted progenitor cell | 6.86e-13 | 66 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
granulocyte monocyte progenitor cell | 1.07e-12 | 67 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
nongranular leukocyte | 1.77e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.59e-09 | 120 |
basophil | 2.63e-07 | 3 |
non-classical monocyte | 2.97e-07 | 3 |
CD14-low, CD16-positive monocyte | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.57e-11 | 76 |
bone element | 2.43e-10 | 82 |
skeletal element | 2.12e-09 | 90 |
immune system | 4.35e-09 | 93 |
hematopoietic system | 1.31e-08 | 98 |
blood island | 1.31e-08 | 98 |
skeletal system | 1.97e-08 | 100 |
hemolymphoid system | 8.78e-08 | 108 |