FFCP PHASE1:Hg19::chr7:29519331..29519340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000412711_5end | |association_with_transcript=3bp_to_ENST00000412711_5end | ||
|cluster_id=chr7:29519331..29519340,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_17_at_CHN2_5end | |description=CAGE_peak_17_at_CHN2_5end | ||
|id=chr7:29519331..29519340,+ | |id=chr7:29519331..29519340,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.71e-19;1!UBERON:0003056;3.06e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p17@CHN2 | |short_description=p17@CHN2 | ||
}} | }} |
Latest revision as of 04:18, 18 September 2015
Short description: | p17@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_CHN2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 3bp_to_ENST00000412711_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 1.30e-37 | 2 |
regional part of epithalamus | 1.30e-37 | 2 |
secretory circumventricular organ | 1.30e-37 | 2 |
circumventricular organ | 1.30e-37 | 2 |
epithalamus | 1.30e-37 | 2 |
gland of diencephalon | 2.26e-19 | 4 |
neuroendocrine gland | 2.26e-19 | 4 |
regional part of diencephalon | 2.26e-19 | 4 |
small intestine | 2.34e-15 | 4 |
diencephalon | 1.68e-11 | 7 |
future diencephalon | 1.68e-11 | 7 |
Ammon's horn | 2.72e-10 | 2 |
lobe parts of cerebral cortex | 2.72e-10 | 2 |
hippocampal formation | 2.72e-10 | 2 |
limbic lobe | 2.72e-10 | 2 |
intestine | 1.17e-09 | 17 |
duodenum | 3.35e-07 | 2 |
gastrointestinal system | 7.41e-07 | 25 |