FFCP PHASE1:Hg19::chr21:35303905..35303944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506334 | |EntrezGene=100506334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=389bp_to_NR_038883_5end | |association_with_transcript=389bp_to_NR_038883_5end | ||
|cluster_id=chr21:35303905..35303944,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_1_at_LOC100506334_5end | |description=CAGE_peak_1_at_LOC100506334_5end | ||
|id=chr21:35303905..35303944,+ | |id=chr21:35303905..35303944,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.50e-14!25;CL:0000827!1.50e-14!25;CL:0000791!5.66e-13!18;CL:0000789!5.66e-13!18;CL:0002420!5.66e-13!18;CL:0002419!5.66e-13!18;CL:0000790!5.66e-13!18;CL:0000625!2.26e-09!11;CL:0000838!1.72e-08!52;CL:0000542!4.70e-08!53;CL:0000051!4.70e-08!53 | |ontology_enrichment_celltype=CL:0000084!1.50e-14!25;CL:0000827!1.50e-14!25;CL:0000791!5.66e-13!18;CL:0000789!5.66e-13!18;CL:0002420!5.66e-13!18;CL:0002419!5.66e-13!18;CL:0000790!5.66e-13!18;CL:0000625!2.26e-09!11;CL:0000838!1.72e-08!52;CL:0000542!4.70e-08!53;CL:0000051!4.70e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.86e-30;25!CL:0000791;7.75e-27;18!CL:0000789;7.75e-27;18!CL:0002419;7.75e-27;18!CL:0000625;2.62e-19;11!CL:0000542;2.11e-13;53!CL:0000624;4.56e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.75e-30,25;CL:0000827,1.75e-30,25;CL:0000791,6.73e-27,18;CL:0000789,6.73e-27,18;CL:0002420,6.73e-27,18;CL:0002419,6.73e-27,18;CL:0000790,6.73e-27,18;CL:0000838,1.67e-22,52;CL:0000542,6.81e-22,53;CL:0000051,6.81e-22,53;CL:0000625,2.46e-19,11;CL:0000624,4.19e-11,6;CL:0002087,3.69e-09,115;CL:0000738,1.17e-08,136;CL:0000037,3.94e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;7.75e-27;18!CL:0000051;2.11e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.47e-09!15;UBERON:0000179!2.47e-09!15;UBERON:0000463!2.47e-09!15 | |ontology_enrichment_uberon=UBERON:0000178!2.47e-09!15;UBERON:0000179!2.47e-09!15;UBERON:0000463!2.47e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-16;15!UBERON:0000179;1.78e-16;15!UBERON:0000463;1.78e-16;15!UBERON:0002390;2.16e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.24e-16,15;UBERON:0000179,2.24e-16,15;UBERON:0000463,2.24e-16,15;UBERON:0006562,4.77e-10,11;UBERON:0001042,5.84e-09,10;UBERON:0009145,5.84e-09,10 | |||
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| ||
|short_description=p1@LOC100506334 | |short_description=p1@LOC100506334 | ||
}} | }} |
Latest revision as of 05:15, 18 September 2015
Short description: | p1@LOC100506334 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100506334_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 389bp_to_NR_038883_5end |
EntrezGene: | LOC100506334 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.75e-30 | 25 |
pro-T cell | 1.75e-30 | 25 |
mature alpha-beta T cell | 6.73e-27 | 18 |
alpha-beta T cell | 6.73e-27 | 18 |
immature T cell | 6.73e-27 | 18 |
mature T cell | 6.73e-27 | 18 |
immature alpha-beta T cell | 6.73e-27 | 18 |
lymphoid lineage restricted progenitor cell | 1.67e-22 | 52 |
lymphocyte | 6.81e-22 | 53 |
common lymphoid progenitor | 6.81e-22 | 53 |
CD8-positive, alpha-beta T cell | 2.46e-19 | 11 |
CD4-positive, alpha-beta T cell | 4.19e-11 | 6 |
nongranular leukocyte | 3.69e-09 | 115 |
leukocyte | 1.17e-08 | 136 |
hematopoietic stem cell | 3.94e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 2.24e-16 | 15 |
haemolymphatic fluid | 2.24e-16 | 15 |
organism substance | 2.24e-16 | 15 |
pharynx | 4.77e-10 | 11 |
chordate pharynx | 5.84e-09 | 10 |
pharyngeal region of foregut | 5.84e-09 | 10 |