FFCP PHASE1:Hg19::chr21:35303905..35303944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100506334 | |EntrezGene=100506334 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=389bp_to_NR_038883_5end | |association_with_transcript=389bp_to_NR_038883_5end | ||
|cluster_id=chr21:35303905..35303944,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_1_at_LOC100506334_5end | |description=CAGE_peak_1_at_LOC100506334_5end | ||
|id=chr21:35303905..35303944,+ | |id=chr21:35303905..35303944,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.50e-14!25;CL:0000827!1.50e-14!25;CL:0000791!5.66e-13!18;CL:0000789!5.66e-13!18;CL:0002420!5.66e-13!18;CL:0002419!5.66e-13!18;CL:0000790!5.66e-13!18;CL:0000625!2.26e-09!11;CL:0000838!1.72e-08!52;CL:0000542!4.70e-08!53;CL:0000051!4.70e-08!53 | |ontology_enrichment_celltype=CL:0000084!1.50e-14!25;CL:0000827!1.50e-14!25;CL:0000791!5.66e-13!18;CL:0000789!5.66e-13!18;CL:0002420!5.66e-13!18;CL:0002419!5.66e-13!18;CL:0000790!5.66e-13!18;CL:0000625!2.26e-09!11;CL:0000838!1.72e-08!52;CL:0000542!4.70e-08!53;CL:0000051!4.70e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.86e-30;25!CL:0000791;7.75e-27;18!CL:0000789;7.75e-27;18!CL:0002419;7.75e-27;18!CL:0000625;2.62e-19;11!CL:0000542;2.11e-13;53!CL:0000624;4.56e-11;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.75e-30,25;CL:0000827,1.75e-30,25;CL:0000791,6.73e-27,18;CL:0000789,6.73e-27,18;CL:0002420,6.73e-27,18;CL:0002419,6.73e-27,18;CL:0000790,6.73e-27,18;CL:0000838,1.67e-22,52;CL:0000542,6.81e-22,53;CL:0000051,6.81e-22,53;CL:0000625,2.46e-19,11;CL:0000624,4.19e-11,6;CL:0002087,3.69e-09,115;CL:0000738,1.17e-08,136;CL:0000037,3.94e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;7.75e-27;18!CL:0000051;2.11e-13;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.47e-09!15;UBERON:0000179!2.47e-09!15;UBERON:0000463!2.47e-09!15 | |ontology_enrichment_uberon=UBERON:0000178!2.47e-09!15;UBERON:0000179!2.47e-09!15;UBERON:0000463!2.47e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.78e-16;15!UBERON:0000179;1.78e-16;15!UBERON:0000463;1.78e-16;15!UBERON:0002390;2.16e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.24e-16,15;UBERON:0000179,2.24e-16,15;UBERON:0000463,2.24e-16,15;UBERON:0006562,4.77e-10,11;UBERON:0001042,5.84e-09,10;UBERON:0009145,5.84e-09,10 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.37129905888014,0,0,0,0,0,0.123121058076788,0,0,0,0,0.125542639594803,0,0,0,1.18009283054671,2.30297638858328,0.309632246632152,0.919421224478927,0.30120591877825,0.739508020333575,0,0,0.293600439334847,1.66198622559563,1.20326668482085,0.434021741431704,0.671746422719773,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0.645484683583826,0,0.188242339542605,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0.316462387440884,0.211255286311942,0,0.419317291016752,0.336985893439485,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,2.18455444504853,0,0.853460445133014,0,0.574752439954483,0,1.90810750907073,0.569212969109448,0,1.14681968437569,0,0.560508562981536,0.263384084775077,5.50787356318733,4.71612915298998,6.37364646898479,6.52027332023645,8.47397893247335,9.9424039204294,5.84480185223734,10.1383515765508,7.65975359434577,11.7412964129319,10.0197429593056,7.30120522436348,8.19373889627233,8.71520894399483,11.6067007470056,11.302320343667,8.6006206633995,10.4340922954988,10.4535523804977,6.68525121915641,8.81407135284419,7.90343124610049,8.6026695286631,10.8312240870193,5.85975108470777,8.55406840003537,7.22760571573309,9.08704939196371,11.2437653897111,7.57687206540854,6.56902397536837,5.84659555351724,6.68600489458768,5.21367853978076,0,0,0.12786256184353,0,0,0,0.795285947051099,0,0,0,0,0.654895377488563,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,1.14398982156026,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0,0.506522046658319,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0,0.323745888736263,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0.779496041289589,0.252433774244115,0.0920498986422993,0.161646056818812,0,0,0,0.57978255948989,0.272746120590835,1.43402297694502,0.121973706129595,0.530119073285941,0.116193942869518,0.10366105501537,0.504641701751257,0.36497735907583,0,0,0,1.85747171212792,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,5.29755719297581,1.72183813960359,0,0.439001141634502,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.425325291727159,0,0.871901815541886,0,0,0.352193736052904,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0.355391948742546,0,0,0,0.199945982364114,0,0,4.21667878966063,0.718874566474748,0,0,0,0.410952645100767,0.537182889719687,0.112085143993527,2.95546140302891,4.09692392233083,3.20857590699371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,4.34212854858063,3.23571301227925,2.34800627167578,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.616838775210622,0.177561725313127,0.328508624055237,0,0.348631135379878,0.725156697549733,1.20303882181971,0.460404944679482,0.229628896329213,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.165018999841176,0,0.650060246036521,0,0,0.462145851343933,0.15350367472613,0,0,0.290033387828457,0,0.0890320356467374,0.330569830721956,0.576570202095319,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0.54907405947211,0,0,0,0.421258456238981,0,0.731140468893853,0,0.682499557039929,0.141405431953713,2.26016233240486,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0.0982490410131212,0,0.709522128141196,0.633322905892992,0,0,0,1.15466535270614,0.670302275535787,1.08890984861323,0.847294206991012,0,0,0.443430153536676,0,3.55213326462519,6.117097657139,2.27858874869665,6.67048971281809,5.75907182320672,3.24236655596359,4.32025149790492,7.9312517629427,0,0,0,0,7.64626828775158,3.27252479402705,3.50737800003409,0,0,1.48171507906718,0.649243880549111,0,2.05411211129873,0.313359791546046,0,0,0.1605880751037,0.80719882876419,0.851692475380653,0,0.307240764308458,0.447352215784832,0.500547425135725,0.390776190804081,0,0,0.540911356951966,0,2.81974010175699,1.30998378285754,0.146508179271894,0,5.01495229248653,0,0.47748896947538,0.296964680832639,0,0,0.422008249231538,0.445234820091624,0,5.48926061132783,0.398495976502139,2.48655523978033,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.910347586283997,1.77977555204936,1.89110145414349,0.689486746482929,0,0.347249989866585,0,0,0,0.110579259931225,0,0,0,2.78847488557207,0.307801034015188,0.569710279235006,0.46112780877612,0,0.108647371922008,0.638002319463839,0.274792780205587,0.533034776018635,2.04386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| ||
|short_description=p1@LOC100506334 | |short_description=p1@LOC100506334 | ||
}} | }} |
Latest revision as of 05:15, 18 September 2015
Short description: | p1@LOC100506334 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100506334_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 389bp_to_NR_038883_5end |
EntrezGene: | LOC100506334 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.75e-30 | 25 |
pro-T cell | 1.75e-30 | 25 |
mature alpha-beta T cell | 6.73e-27 | 18 |
alpha-beta T cell | 6.73e-27 | 18 |
immature T cell | 6.73e-27 | 18 |
mature T cell | 6.73e-27 | 18 |
immature alpha-beta T cell | 6.73e-27 | 18 |
lymphoid lineage restricted progenitor cell | 1.67e-22 | 52 |
lymphocyte | 6.81e-22 | 53 |
common lymphoid progenitor | 6.81e-22 | 53 |
CD8-positive, alpha-beta T cell | 2.46e-19 | 11 |
CD4-positive, alpha-beta T cell | 4.19e-11 | 6 |
nongranular leukocyte | 3.69e-09 | 115 |
leukocyte | 1.17e-08 | 136 |
hematopoietic stem cell | 3.94e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
blood | 2.24e-16 | 15 |
haemolymphatic fluid | 2.24e-16 | 15 |
organism substance | 2.24e-16 | 15 |
pharynx | 4.77e-10 | 11 |
chordate pharynx | 5.84e-09 | 10 |
pharyngeal region of foregut | 5.84e-09 | 10 |