FFCP PHASE1:Hg19::chr1:44399151..44399171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9048 | |EntrezGene=9048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=727 | |HGNC=727 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T4W7 | |UniProt=Q5T4W7 | ||
|association_with_transcript=159bp_to_ENST00000372359,ENST00000414809,NM_001136215,NM_057090,NM_057091,uc001cks.2,uc001ckt.2,uc001ckv.2_5end | |association_with_transcript=159bp_to_ENST00000372359,ENST00000414809,NM_001136215,NM_057090,NM_057091,uc001cks.2,uc001ckt.2,uc001ckv.2_5end | ||
|cluster_id=chr1:44399151..44399171,+ | |||
|description=CAGE_peak_5_at_ARTN_5end | |description=CAGE_peak_5_at_ARTN_5end | ||
|id=chr1:44399151..44399171,+ | |id=chr1:44399151..44399171,+ | ||
|ontology_enrichment_celltype=CL:0002076!2.31e-12!43;CL:0002368!1.75e-09!13;CL:0002159!1.17e-08!13;CL:0000223!1.45e-07!59 | |ontology_enrichment_celltype=CL:0002076!2.31e-12!43;CL:0002368!1.75e-09!13;CL:0002159!1.17e-08!13;CL:0000223!1.45e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000312;1.36e-12;5!CL:0000240;1.40e-10;6!CL:0000311;1.40e-10;6!CL:0000079;1.40e-10;6!CL:0000237;1.40e-10;6!CL:0000307;4.07e-10;3!CL:0002605;7.47e-10;3!CL:0000128;3.88e-09;7!CL:0000126;3.88e-09;7!CL:0000127;3.88e-09;7!CL:0002368;1.65e-08;13!CL:0002252;5.20e-08;1!CL:0002159;8.44e-08;14!CL:0002327;1.34e-07;4!CL:0002202;2.47e-07;9!CL:0002632;2.47e-07;9!CL:0000362;3.31e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,1.71e-12,5;CL:0000240,1.69e-10,6;CL:0000311,1.69e-10,6;CL:0000079,1.69e-10,6;CL:0000237,1.69e-10,6;CL:0000036,1.69e-10,6;CL:0000357,1.69e-10,6;CL:0000114,1.69e-10,6;CL:0002605,4.58e-10,3;CL:0000068,7.18e-10,3;CL:0000069,7.18e-10,3;CL:0000307,7.18e-10,3;CL:0000377,7.18e-10,3;CL:0000128,2.25e-09,7;CL:0000126,2.25e-09,7;CL:0000127,2.25e-09,7;CL:0002453,2.25e-09,7;CL:0002368,2.25e-08,13;CL:0002252,5.40e-08,1;CL:0002159,1.07e-07,14;CL:0002327,1.59e-07,4;CL:0000362,3.73e-07,9;CL:0002202,3.90e-07,9;CL:0002632,3.90e-07,9;CL:0002076,5.16e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000357;1.40e-10;6!CL:0000114;1.40e-10;6!CL:0000377;4.07e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;3.13e-11;10!DOID:3095;1.35e-07;22!DOID:2994;1.35e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.72e-11,10;DOID:3095,1.45e-07,22;DOID:2994,1.45e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!5.15e-09!173;UBERON:0006601!5.15e-09!173;UBERON:0002346!3.53e-08!90;UBERON:0000062!7.84e-08!511;UBERON:0000153!8.38e-08!129;UBERON:0007811!8.38e-08!129;UBERON:0000033!8.78e-08!123;UBERON:0004121!3.04e-07!169;UBERON:0001004!6.41e-07!72 | |ontology_enrichment_uberon=UBERON:0000924!5.15e-09!173;UBERON:0006601!5.15e-09!173;UBERON:0002346!3.53e-08!90;UBERON:0000062!7.84e-08!511;UBERON:0000153!8.38e-08!129;UBERON:0007811!8.38e-08!129;UBERON:0000033!8.78e-08!123;UBERON:0004121!3.04e-07!169;UBERON:0001004!6.41e-07!72 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;8.66e-28;4!UBERON:0000923;8.66e-28;4!UBERON:0010316;8.66e-28;4!UBERON:0005291;8.66e-28;4!UBERON:0002050;2.77e-22;5!UBERON:0005423;2.77e-22;5!UBERON:0001000;5.20e-08;1!UBERON:0005352;5.20e-08;1!UBERON:0001911;1.34e-07;4!UBERON:0001003;2.75e-07;15!UBERON:0007376;2.75e-07;15!UBERON:0010371;4.57e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000076,5.68e-08,8;UBERON:0001000,6.63e-08,1;UBERON:0005352,6.63e-08,1;UBERON:0001911,1.59e-07,4;UBERON:0005333,1.59e-07,4;UBERON:0008425,1.59e-07,4;UBERON:0005311,1.59e-07,4;UBERON:0001003,2.67e-07,15;UBERON:0007376,2.67e-07,15;UBERON:0007383,2.67e-07,15;UBERON:0010371,6.23e-07,104;UBERON:0004121,9.87e-07,171;UBERON:0000924,9.87e-07,171;UBERON:0006601,9.87e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0.492484232307152,0,1.56727360739044,1.71741592278634,0.684372125364421,1.25542639594803,0,0,0,0,0,0,0.919421224478927,0.30120591877825,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0.283604451492204,0,0.087834785693126,0.261958150995425,0.728590576585084,1.11235332835329,0,0,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0.161646056818812,0,0,0.169560592310488,1.54608682530637,0.545492241181669,0.286804595389004,0,0,0,0.10366105501537,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.171567810298526,1.64625428112938,1.1240175325762,1.10581869652794,0.462942225792648,0.325808305310325,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0.93733833986777,0.671928512795438,0.992425680696705,1.34337784054272,0,1.15014803749563,0,0,0.829312462163088,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0.802025881213139,1.65745780084613,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0.0890320356467374,0.991709492165869,0.192190067365106,1.53135254993501,0.809262246844399,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.192444225451024,3.35151137767894,1.08890984861323,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,1.61439765752838,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0.933118762985422,0,0,0.511572370226872,0.394573622547734,0,0,0,0,0,0,0,0,0.682760689712998,0,0,0,4.95727842751532,0.173624994933292,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.461701551022782,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,0,1.18375320854817,0,0,0,0.300646838828985,0.103688191397247,0,0,0,0,0,0,0,0.293977192243133,0.435296032902013,0,0,0,0.146178634172371,0.164230914106418,0.484945082442097,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.426905989478705,0.19980960958213,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0.77380195455795,0.121499113316049,0,0.157611414598396,0,0.105600336519406,1.43429871466276,0.191915197319445,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0.39669780522807,0,0,0,1.10043013569766,0,0,0,0,0.638341257770182,0,0,0,0,0.628216385000937,0,0.122026264901963,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,1.15761237161917,0,0,0,0,0.883445729729405,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699397538597222,0,0,0,0.786329709279482,0,1.52759276958623,8.07784696386395,1.36329340684902,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0.138314504928436,0,0,0.785181748008205,0,0.183428598521679,0.231051332300676,0,0.690359926060101,0.198916222116275,0.376051641746286,0.80682027481408,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0,4.92439484206938,0.127762427639595,0,0.672567444437648,0.606965604236632,0.227662191351298,0.709618961301111,0,0,0.271878931907327,0,0,0,0.706437835654626,0,0,0,0,1.43325506366115,0.142953088353313,0,0,0,0,0.414432328326074,0,0.691259661814092,0,0,0,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0.701818390386317,0.596852325484105,0,0.22589216407792,0,0.301925687133347,0.0771741581079447,0.218559560503957,0.470317296361523,0,0,0.196308467114945,0,0,0,0,0.193373663920732,0,0.178553938605658,0,0,0.730336388246517,0,0.286679166302903,0,0.203974470572744,0,0.5290268405154,0,0,0.432626562123789,0,0,0.126698501011437,0.203977659483963,0,1.10273879441814,0,0.303114792872958,0,0,0,0.213233981900981,0.23806443146374,0,0,0.112131862580613,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0.325613074443898,0.106727345877715,0,0,0,0.855690109280065,0.406896178315738,0,0,0 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| ||
|short_description=p5@ARTN | |short_description=p5@ARTN | ||
}} | }} |
Latest revision as of 05:22, 18 September 2015
Short description: | p5@ARTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ARTN_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_ENST00000372359, ENST00000414809, NM_001136215, NM_057090, NM_057091, uc001cks.2, uc001ckt.2, uc001ckv.2_5end |
EntrezGene: | ARTN |
HGNC: | 727 |
UniProt: | Q5T4W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 1.71e-12 | 5 |
stratified squamous epithelial cell | 1.69e-10 | 6 |
keratin accumulating cell | 1.69e-10 | 6 |
stratified epithelial cell | 1.69e-10 | 6 |
keratinizing barrier epithelial cell | 1.69e-10 | 6 |
epithelial fate stem cell | 1.69e-10 | 6 |
stratified epithelial stem cell | 1.69e-10 | 6 |
surface ectodermal cell | 1.69e-10 | 6 |
astrocyte of the cerebral cortex | 4.58e-10 | 3 |
duct epithelial cell | 7.18e-10 | 3 |
branched duct epithelial cell | 7.18e-10 | 3 |
tracheal epithelial cell | 7.18e-10 | 3 |
tracheoblast | 7.18e-10 | 3 |
oligodendrocyte | 2.25e-09 | 7 |
macroglial cell | 2.25e-09 | 7 |
astrocyte | 2.25e-09 | 7 |
oligodendrocyte precursor cell | 2.25e-09 | 7 |
respiratory epithelial cell | 2.25e-08 | 13 |
epithelial cell of esophagus | 5.40e-08 | 1 |
general ecto-epithelial cell | 1.07e-07 | 14 |
mammary gland epithelial cell | 1.59e-07 | 4 |
epidermal cell | 3.73e-07 | 9 |
epithelial cell of tracheobronchial tree | 3.90e-07 | 9 |
epithelial cell of lower respiratory tract | 3.90e-07 | 9 |
endo-epithelial cell | 5.16e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
external ectoderm | 5.68e-08 | 8 |
vas deferens | 6.63e-08 | 1 |
spermatic cord | 6.63e-08 | 1 |
mammary gland | 1.59e-07 | 4 |
mammary bud | 1.59e-07 | 4 |
mammary ridge | 1.59e-07 | 4 |
mammary placode | 1.59e-07 | 4 |
skin epidermis | 2.67e-07 | 15 |
outer epithelium | 2.67e-07 | 15 |
enveloping layer of ectoderm | 2.67e-07 | 15 |
ecto-epithelium | 6.23e-07 | 104 |
ectoderm-derived structure | 9.87e-07 | 171 |
ectoderm | 9.87e-07 | 171 |
presumptive ectoderm | 9.87e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.72e-11 | 10 |
germ cell and embryonal cancer | 1.45e-07 | 22 |
germ cell cancer | 1.45e-07 | 22 |