FFCP PHASE1:Hg19::chr13:95954052..95954075,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10257 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=55 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVZ4,B7Z3Q7,O15439,Q59GY6 | |||
|association_with_transcript=-365bp_to_ENST00000412704,ENST00000431522,ENST00000536256,NM_001105515,NM_005845,uc001vmd.3,uc001vme.2,uc001vmf.2,uc010afk.2,uc010afl.1,uc010afm.1,uc010tih.1_5end | |||
|cluster_id=chr13:95954052..95954075,- | |||
|description=CAGE_peak_3_at_ABCC4_5end | |||
|id=chr13:95954052..95954075,- | |||
|ontology_enrichment_celltype=CL:0000243!3.45e-07!15;CL:0000125!3.45e-07!15;CL:0000030!3.45e-07!15;CL:0000339!3.45e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000243;1.66e-09;15!CL:0000125;1.66e-09;15!CL:0000095;4.62e-08;17!CL:0002319;6.28e-08;25!CL:0002321;8.44e-08;15!CL:0000128;4.44e-07;7!CL:0000126;4.44e-07;7!CL:0000127;4.44e-07;7!CL:0000333;6.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,1.01e-09,15;CL:0000125,1.01e-09,15;CL:0000030,1.01e-09,15;CL:0000339,1.01e-09,15;CL:0000333,5.10e-09,41;CL:0002319,2.76e-08,25;CL:0000095,3.00e-08,17;CL:0000123,3.00e-08,17;CL:0000133,9.86e-08,59;CL:0000128,4.10e-07,7;CL:0000126,4.10e-07,7;CL:0000127,4.10e-07,7;CL:0002453,4.10e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000339;1.66e-09;15 | |||
|ontology_enrichment_disease=DOID:162!2.87e-13!235;DOID:14566!4.56e-13!239;DOID:0050686!3.83e-08!137;DOID:8692!5.00e-08!31;DOID:1240!5.31e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.66e-09;31!DOID:1036;3.54e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.78e-10,31;DOID:162,1.90e-08,235;DOID:0050686,4.04e-08,137;DOID:14566,7.48e-08,239;DOID:1240,2.17e-07,39;DOID:1036,2.45e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0000489!2.76e-07!32;UBERON:0006554!4.41e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0001155;5.97e-08;9!UBERON:0000489;3.99e-07;29!UBERON:0000013;6.07e-07;5!UBERON:0002410;6.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.11e-08,9;UBERON:0006554,9.35e-08,47;UBERON:0001046,1.07e-07,19;UBERON:0000489,1.43e-07,31;UBERON:0001008,1.91e-07,48;UBERON:0000013,6.69e-07,5;UBERON:0002410,6.69e-07,5 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.986680828671798,1.0007329835313,0.893922188854576,0,0,0,0,0,1.39560233594486,0,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,1.96993692922861,2.04000691244253,1.25381888591235,2.86235987131057,2.87436292653057,2.63639543149086,0.687720651731561,0.903106483949403,0.787107813136792,0,0,0,0,0.6024118375565,0,0,0.284338464974843,0,0,0,0,0,0.647787332037959,0.257575567634187,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.790152254325231,0.196709770113833,0,0,0,0,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0,0.722878304769133,0.50133791063589,0.144846518960824,0.795285947051099,0,0.378139268656271,1.10864698731282,1.05401742831751,1.89919659471683,0,0.370784442784429,0.324547393654683,1.0447784237956,0.26591592103773,0,0,0,1.59009925893364,0,0.347140501607594,0.56530794192401,0.838998872419812,0,0.417989933073621,0.516833518338658,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,2.43042584364528,0.714397826272638,0.673588117878509,0.900891843866578,0,0,0.549605231791222,0,0,0,0.993943903390637,0.506522046658319,0.926864265692532,1.14734648299525,0,0,1.06748995729705,0,1.24484414159907,0.67355336034844,0.817309515567294,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0.149448680551801,1.29177948508141,0.809364721840658,1.12360645361799,0.408308342509787,0.61417158655884,0.516628905878827,1.18800285728205,1.48360157567134,0,0.718618141816238,0.336672227908132,0.500474079487857,1.10825646193673,0.438977620880838,0.612975591598039,1.65261864797256,0.907457465280168,0.89694817844431,0.85422955527427,0.847727604638247,2.10063767259082,0.618315175430633,1.03056216018252,0,0.675105328965065,0.292311015483596,1.00973509697646,0.0920498986422993,0,2.13005755509969,0.806016785821122,0.169560592310488,0,0.545492241181669,0,1.82960559194393,1.45782745153634,1.2781333715647,1.45125477021519,1.7662459561294,3.28479623168247,0,0,0,0,0,0.591534000199219,0.505754070234305,0.482022059766964,0.661763836394364,0.653638332277218,0,0.674156540800822,0.98110732562673,0.38474715694639,0,1.40241773803446,0.8231480226628,0,1.26755034821831,0.982827216677626,0,0,1.10689594688802,0.686271241194102,0.658501712451753,0,0.301586917234893,0.185176890317059,0.651616610620649,0,0,1.04337364477569,0.352226082707465,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0.984868024349589,0,0.297262324577456,0,0.16798212819886,0.425325291727159,0.0895585227028483,0.290633938513962,0.766765358330422,0,2.11316241631742,2.69526550203004,0.864719720501769,1.2624243342638,0.888970520090367,1.14596527667483,1.17217447210047,0,0.411309970813294,0.600686115687835,2.00078502841405,1.00917975910825,1.30788020649984,0.80672114403045,0.775630294546667,0,0.845302752556,1.06375246633948,1.04007436911366,0.257207374262142,0,0.799266537048298,0.714889968290738,0,0,0.977208552881205,0,0,0,0.871533458600294,0.199945982364114,1.2162378064119,1.50677127429638,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0.821905290201534,1.07436577943937,0.112085143993527,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.157702415033935,0.585707074963566,0,0,1.03473071292505,1.99267679560631,0.737476674166813,0.695068915744663,0.391602314925481,0,0,0,0,0,0,0,0.248107807818777,1.68808170616869,0,1.40953064181271,1.02341449813341,0.482561763430822,0,0.462629081407967,0.355123450626254,0.328508624055237,0.519254429183621,0.348631135379878,1.45031339509947,0,0.0920809889358963,1.83703117063371,1.27463817604702,1.18011973463482,0.902399225814824,0.385076685522074,0.784349769176855,2.92278449306521,1.68882606228601,0,0.170093705276516,1.0795795805107,1.54227252690289,0.270946437543853,0,1.52925763827023,2.49322802678617,0.895499018888713,4.16593765627276,2.0914836081992,0.512900250232778,0.656029291399411,0.976135183992909,0.103041011647722,1.28197250745681,1.23764249880882,0,0,0,0.870036464629098,0.462145851343933,0.614014698904518,0.689182862422653,0.429680979473094,0.435050081742686,0.681813019328807,0.979352392114111,0,0.192190067365106,0.765676274967505,0,0,1.25924938732256,0,0.308033580176089,0,0,0.37064843820784,0.429374660225974,1.116475108079,1.58189712359363,1.33441135746677,0.511795582622668,0.42793898803392,0.318203247925937,0,1.2591072030832,2.47083326762449,1.53156123049392,0,0,0,0,0,0,1.22849920267187,2.40389234321312,0,0,0,0,0,1.31178950409327,0.202910376962704,0,0.845086807596724,0.430234056612155,0.687743287091848,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0.0962221127255121,0,0,0.564862804660675,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0,0,0.411362273086194,0,0,0,1.6023610669121,2.88743956579008,0.490080431962063,0.185803175125719,0.144269212976445,0.853702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| |||
|short_description=p3@ABCC4 | |||
}} |
Latest revision as of 05:55, 18 September 2015
Short description: | p3@ABCC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABCC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -365bp_to_ENST00000412704, ENST00000431522, ENST00000536256, NM_001105515, NM_005845, uc001vmd.3, uc001vme.2, uc001vmf.2, uc010afk.2, uc010afl.1, uc010afm.1, uc010tih.1_5end |
EntrezGene: | ABCC4 |
HGNC: | 55 |
UniProt: | Q8IVZ4B7Z3Q7O15439Q59GY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 1.01e-09 | 15 |
glial cell | 1.01e-09 | 15 |
glioblast | 1.01e-09 | 15 |
glioblast (sensu Vertebrata) | 1.01e-09 | 15 |
migratory neural crest cell | 5.10e-09 | 41 |
neural cell | 2.76e-08 | 25 |
neuron associated cell | 3.00e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 3.00e-08 | 17 |
neurectodermal cell | 9.86e-08 | 59 |
oligodendrocyte | 4.10e-07 | 7 |
macroglial cell | 4.10e-07 | 7 |
astrocyte | 4.10e-07 | 7 |
oligodendrocyte precursor cell | 4.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
colon | 1.11e-08 | 9 |
urinary system structure | 9.35e-08 | 47 |
hindgut | 1.07e-07 | 19 |
cavitated compound organ | 1.43e-07 | 31 |
renal system | 1.91e-07 | 48 |
sympathetic nervous system | 6.69e-07 | 5 |
autonomic nervous system | 6.69e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.78e-10 | 31 |
cancer | 1.90e-08 | 235 |
organ system cancer | 4.04e-08 | 137 |
disease of cellular proliferation | 7.48e-08 | 239 |
leukemia | 2.17e-07 | 39 |
chronic leukemia | 2.45e-07 | 8 |