FFCP PHASE1:Hg19::chr15:57211660..57211687,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:57211660..57211687,+
|short_description=p6@TCF12
|description=CAGE_peak_6_at_TCF12_5end
|association_with_transcript=-27bp_to_ENST00000561152_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6938 | |EntrezGene=6938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11623 | |HGNC=11623 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENST00000561152_5end | |||
|cluster_id=chr15:57211660..57211687,+ | |||
|description=CAGE_peak_6_at_TCF12_5end | |||
|id=chr15:57211660..57211687,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.98e-10!24;CL:0000860!1.08e-08!45;CL:0002057!1.61e-08!42;CL:0000071!2.06e-08!18;CL:0002546!2.06e-08!18;CL:0000115!8.56e-08!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.61e-11;24!CL:0000071;6.97e-09;18!CL:0000860;3.84e-08;33!CL:0002057;3.84e-08;33!CL:0000115;2.69e-07;36!CL:1000413;7.50e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.89e-11,24;CL:0000071,1.95e-09,18;CL:0002546,1.95e-09,18;CL:0000860,2.65e-09,42;CL:0002057,2.65e-09,42;CL:0000115,1.29e-08,36;CL:0000557,1.12e-07,67;CL:1000413,1.80e-07,9;CL:0000763,4.70e-07,108;CL:0000049,4.70e-07,108;CL:0000473,4.92e-07,48;CL:0000234,4.92e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002546;6.97e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.69e-11!69;UBERON:0001981!4.00e-10!60;UBERON:0007500!4.00e-10!60;UBERON:0004537!4.00e-10!60;UBERON:0006965!4.00e-10!60;UBERON:0002049!9.85e-10!79;UBERON:0007798!9.85e-10!79;UBERON:0000025!4.84e-09!194;UBERON:0001637!5.08e-09!42;UBERON:0003509!5.08e-09!42;UBERON:0004572!5.08e-09!42;UBERON:0001986!2.06e-08!18;UBERON:0004638!2.06e-08!18;UBERON:0004852!2.06e-08!18;UBERON:0004111!2.14e-08!241;UBERON:0004872!3.32e-07!84;UBERON:0000480!4.84e-07!626;UBERON:0004573!6.06e-07!33;UBERON:0004571!6.06e-07!33;UBERON:0000467!7.11e-07!625;UBERON:0003080!9.25e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.97e-09;18!UBERON:0001986;6.97e-09;18!UBERON:0004852;6.97e-09;18!UBERON:0001637;3.93e-07;42!UBERON:0003509;3.93e-07;42!UBERON:0004572;3.93e-07;42!UBERON:0003915;7.50e-07;9!UBERON:0004700;7.50e-07;9!UBERON:0001917;7.50e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.55e-11,68;UBERON:0002049,4.39e-10,78;UBERON:0007798,4.39e-10,78;UBERON:0007500,6.78e-10,59;UBERON:0001981,6.78e-10,59;UBERON:0004537,6.78e-10,59;UBERON:0006965,6.78e-10,59;UBERON:0004638,1.95e-09,18;UBERON:0001986,1.95e-09,18;UBERON:0004852,1.95e-09,18;UBERON:0003081,4.95e-09,203;UBERON:0001637,5.75e-09,42;UBERON:0003509,5.75e-09,42;UBERON:0004572,5.75e-09,42;UBERON:0000025,7.99e-08,192;UBERON:0003915,1.80e-07,9;UBERON:0004700,1.80e-07,9;UBERON:0001917,1.80e-07,9;UBERON:0004535,2.33e-07,109;UBERON:0004872,4.68e-07,83;UBERON:0001009,8.68e-07,112;UBERON:0000487,9.16e-07,22;UBERON:0002405,9.30e-07,93 | |||
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| ||
|short_description=p6@TCF12 | |||
}} | }} |
Latest revision as of 06:00, 18 September 2015
Short description: | p6@TCF12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TCF12_5end |
Coexpression cluster: | NA |
Association with transcript: | -27bp_to_ENST00000561152_5end |
EntrezGene: | TCF12 |
HGNC: | 11623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.89e-11 | 24 |
blood vessel endothelial cell | 1.95e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.95e-09 | 18 |
classical monocyte | 2.65e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.65e-09 | 42 |
endothelial cell | 1.29e-08 | 36 |
granulocyte monocyte progenitor cell | 1.12e-07 | 67 |
endothelial cell of artery | 1.80e-07 | 9 |
myeloid cell | 4.70e-07 | 108 |
common myeloid progenitor | 4.70e-07 | 108 |
defensive cell | 4.92e-07 | 48 |
phagocyte | 4.92e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.55e-11 | 68 |
vasculature | 4.39e-10 | 78 |
vascular system | 4.39e-10 | 78 |
epithelial tube open at both ends | 6.78e-10 | 59 |
blood vessel | 6.78e-10 | 59 |
blood vasculature | 6.78e-10 | 59 |
vascular cord | 6.78e-10 | 59 |
blood vessel endothelium | 1.95e-09 | 18 |
endothelium | 1.95e-09 | 18 |
cardiovascular system endothelium | 1.95e-09 | 18 |
lateral plate mesoderm | 4.95e-09 | 203 |
artery | 5.75e-09 | 42 |
arterial blood vessel | 5.75e-09 | 42 |
arterial system | 5.75e-09 | 42 |
tube | 7.99e-08 | 192 |
endothelial tube | 1.80e-07 | 9 |
arterial system endothelium | 1.80e-07 | 9 |
endothelium of artery | 1.80e-07 | 9 |
cardiovascular system | 2.33e-07 | 109 |
splanchnic layer of lateral plate mesoderm | 4.68e-07 | 83 |
circulatory system | 8.68e-07 | 112 |
simple squamous epithelium | 9.16e-07 | 22 |
immune system | 9.30e-07 | 93 |