FFCP PHASE1:Hg19::chr9:94186131..94186174,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:94186131..94186174,-
|short_description=p2@NFIL3
|description=CAGE_peak_2_at_NFIL3_5end
|association_with_transcript=0bp_to_ENST00000297689,ENST00000375724...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4783 | |EntrezGene=4783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7787 | |HGNC=7787 | ||
|TSSclassifier=strong | |||
|UniProt=Q16649 | |UniProt=Q16649 | ||
|association_with_transcript=0bp_to_ENST00000297689,ENST00000375724,NM_005384,uc004arh.2_5end | |||
|cluster_id=chr9:94186131..94186174,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_NFIL3_5end | |||
|id=chr9:94186131..94186174,- | |||
|ontology_enrichment_celltype=CL:0002057!3.96e-19!42;CL:0000766!1.21e-18!76;CL:0000860!5.92e-18!45;CL:0000557!4.83e-15!71;CL:0002009!8.44e-13!65;CL:0000839!1.25e-12!70;CL:0002194!2.65e-12!63;CL:0000576!2.65e-12!63;CL:0000040!2.65e-12!63;CL:0000559!2.65e-12!63;CL:0000763!6.17e-11!112;CL:0000049!6.17e-11!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.62e-15;33!CL:0002057;6.62e-15;33!CL:0000576;1.95e-10;48!CL:0000473;1.17e-09;39!CL:0000234;1.17e-09;39!CL:0000766;2.17e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.61e-20,72;CL:0000860,3.95e-19,42;CL:0002057,3.95e-19,42;CL:0000557,3.26e-16,67;CL:0000473,1.27e-15,48;CL:0000234,1.27e-15,48;CL:0002009,6.78e-14,61;CL:0000839,1.19e-13,66;CL:0002194,2.17e-13,59;CL:0000576,2.17e-13,59;CL:0000040,2.17e-13,59;CL:0000559,2.17e-13,59;CL:0000763,1.53e-11,108;CL:0000049,1.53e-11,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.34e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.95e-16!102;UBERON:0003061!1.95e-16!102;UBERON:0002371!3.06e-14!80;UBERON:0002193!6.21e-14!112;UBERON:0004765!4.94e-13!101;UBERON:0001434!4.94e-13!101;UBERON:0001474!7.29e-13!86;UBERON:0002405!2.70e-12!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.36e-17,98;UBERON:0003061,2.36e-17,98;UBERON:0002371,3.04e-15,76;UBERON:0001434,6.67e-15,100;UBERON:0004765,9.18e-15,90;UBERON:0002193,1.15e-14,108;UBERON:0001474,1.01e-13,82;UBERON:0002405,3.60e-11,93;UBERON:0002204,8.59e-07,167 | |||
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| ||
|short_description=p2@NFIL3 | |||
}} | }} |
Latest revision as of 06:31, 18 September 2015
Short description: | p2@NFIL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NFIL3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000297689, ENST00000375724, NM_005384, uc004arh.2_5end |
EntrezGene: | NFIL3 |
HGNC: | 7787 |
UniProt: | Q16649 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.61e-20 | 72 |
classical monocyte | 3.95e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.95e-19 | 42 |
granulocyte monocyte progenitor cell | 3.26e-16 | 67 |
defensive cell | 1.27e-15 | 48 |
phagocyte | 1.27e-15 | 48 |
macrophage dendritic cell progenitor | 6.78e-14 | 61 |
myeloid lineage restricted progenitor cell | 1.19e-13 | 66 |
monopoietic cell | 2.17e-13 | 59 |
monocyte | 2.17e-13 | 59 |
monoblast | 2.17e-13 | 59 |
promonocyte | 2.17e-13 | 59 |
myeloid cell | 1.53e-11 | 108 |
common myeloid progenitor | 1.53e-11 | 108 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.36e-17 | 98 |
blood island | 2.36e-17 | 98 |
bone marrow | 3.04e-15 | 76 |
skeletal system | 6.67e-15 | 100 |
skeletal element | 9.18e-15 | 90 |
hemolymphoid system | 1.15e-14 | 108 |
bone element | 1.01e-13 | 82 |
immune system | 3.60e-11 | 93 |
musculoskeletal system | 8.59e-07 | 167 |