FFCP PHASE1:Hg19::chr5:58334948..58334962,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:58334948..58334962,-
|short_description=p21@PDE4D
|description=CAGE_peak_21_at_PDE4D_5end
|association_with_transcript=376bp_to_ENST00000358923,NM_00119722...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=376bp_to_ENST00000358923,NM_001197221,NM_001197222,uc003jrt.2_5end | |||
|cluster_id=chr5:58334948..58334962,- | |||
|coexpression_cluster_id=C1762 | |||
|description=CAGE_peak_21_at_PDE4D_5end | |||
|id=chr5:58334948..58334962,- | |||
|ontology_enrichment_celltype=CL:0000791!1.94e-09!18;CL:0000789!1.94e-09!18;CL:0002420!1.94e-09!18;CL:0002419!1.94e-09!18;CL:0000790!1.94e-09!18;CL:0000084!8.81e-08!25;CL:0000827!8.81e-08!25;CL:0000625!8.66e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000094;7.58e-15;8!CL:0000623;9.90e-12;3!CL:0000767;4.37e-11;3!CL:0000791;1.17e-10;18!CL:0000789;1.17e-10;18!CL:0002419;1.17e-10;18!CL:0000081;1.35e-10;11!CL:0000226;1.67e-10;3!CL:0000842;1.67e-10;3!CL:0000625;1.48e-07;11!CL:0000084;2.76e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,4.95e-15,8;CL:0000623,1.00e-11,3;CL:0000825,1.00e-11,3;CL:0000767,2.44e-11,3;CL:0000791,6.73e-11,18;CL:0000789,6.73e-11,18;CL:0002420,6.73e-11,18;CL:0002419,6.73e-11,18;CL:0000790,6.73e-11,18;CL:0000226,7.92e-11,3;CL:0000842,7.92e-11,3;CL:0000081,1.00e-10,11;CL:0000738,3.23e-08,136;CL:0000625,1.26e-07,11;CL:0000084,1.89e-07,25;CL:0000827,1.89e-07,25;CL:0000838,5.94e-07,52;CL:0000542,8.96e-07,53;CL:0000051,8.96e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.17e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;1.19e-07;2!UBERON:0001905;1.48e-07;2!UBERON:0002757;1.48e-07;2!UBERON:0010134;1.48e-07;2!UBERON:0005408;1.48e-07;2!UBERON:0001899;1.48e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002133,8.59e-08,2;UBERON:0001905,1.12e-07,2;UBERON:0002757,1.12e-07,2;UBERON:0010134,1.12e-07,2;UBERON:0005408,1.12e-07,2;UBERON:0001899,1.12e-07,2 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0,0.618831764800233,1.98838425436749,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0.273748850145768,0,0,0.0821005894499457,0,1.96682138424452,21.1106168953467,4.18003532953405,0,0,0,0,0,0.293600439334847,0.553995408531877,2.4065333696417,3.03815219002193,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,3.36305137788922,0,1.7703879310245,1.96505381374582,3.49522548299166,0.334372990781356,0,0,0,0.779873198196215,0.883817722424512,0.443067789167242,1.35401931882508,0.512365278902701,0.390178042679635,1.15106533222573,1.38175008892924,1.73881851441031,0.889719378972363,0.802622484269139,0,0.566546713487831,0.383220493601921,0.34362744548263,1.26509846009751,0.95569624297229,0.651083453856419,1.90090408889675,0.903450714466637,0.383959833463255,1.24930726552346,0.710331756132051,0,10.6851573909108,6.95344509037119,4.92402973201517,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.579386075843295,0,0.486634870302636,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0,1.31780417436063,0,0,0,0.12663051166458,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,0,0.942974704487816,0.326923806226917,0.454072282934794,0,0.468642863667593,0.936480230490962,0,0.298897361103602,1.64408298101271,0.323745888736263,0.140450806702248,0.816616685019573,0.491337269247072,0.826606249406124,1.18800285728205,1.23633464639278,0,0,0.336672227908132,0,0.831192346452549,0.438977620880838,0.612975591598039,1.05166641234618,0,0.358779271377724,1.06778694409284,0.211931901159562,0.300091096084402,0.92747276314595,0.515281080091258,0,0.168776332241266,0.292311015483596,0.504867548488229,0,0.646584227275248,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0.185176890317059,0.325808305310325,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0.2933531432838,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.857867961948885,0,0,0.325736184293735,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0.358121926479791,0.896681151948218,13.7921532141349,9.48761329381876,11.0375011200584,0,0,0,0,0,0.749007023947182,2.99161459204025,2.07207756718018,1.8403723757871,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,1.6541442089831,1.94142780736755,5.01619521676188,0,0,0.30239029332968,0.248107807818777,0,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0,0.0821271560138091,2.59627214591811,0,0,0,0,0.34444334449382,0.546273504020151,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0.082509499920588,0,0,0,0.193341436584244,0.770243085573222,0.15350367472613,0.827019434907183,0.537101224341368,0.580066775656914,0.170453254832202,0.0890320356467374,0,0,0,0,0,0.31481234683064,1.3940745403212,0,1.06461206063404,0,0.37064843820784,0.858749320451947,0.372158369359667,0,0.38126038784765,0.255897791311334,0.42793898803392,0.318203247925937,0,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0,0.243713489631284,2.11300293513511,0.9554993798559,0.565621727814851,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0,0,0.0982490410131212,0.35667105148125,0,0.633322905892992,0.329294892959902,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,1.92495971052672,0,0,0,0.142283686696828,0,0,0,0.211673582723883,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.293016358543788,0.606802608747567,0.66866030566487,0,0,0.296964680832639,0.307160702099232,0,0,0.556543525114529,0,1.47787785689595,0,1.10513566212459,0,0.102268682502155,0,0,0.0898683511473268,0,0,0.789147245095469,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0.331737779793674,0.295547618953547,0.438770794307945,0.435753854075961,0,0.230850775511391,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0.432777279484182,0,0.353830258013357,0,0.296521128680622,0.370691816839509,0.417687798021821,0,0,0,0,0.19566461893209,1.21390189767046,0,0,0,0.568679216656392,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.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| ||
|short_description=p21@PDE4D | |||
}} | }} |
Latest revision as of 07:02, 18 September 2015
Short description: | p21@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_PDE4D_5end |
Coexpression cluster: | C1762_Basophils_Natural_CD8_heart_Peripheral_CD4_CD14 |
Association with transcript: | 376bp_to_ENST00000358923, NM_001197221, NM_001197222, uc003jrt.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 4.95e-15 | 8 |
natural killer cell | 1.00e-11 | 3 |
pro-NK cell | 1.00e-11 | 3 |
basophil | 2.44e-11 | 3 |
mature alpha-beta T cell | 6.73e-11 | 18 |
alpha-beta T cell | 6.73e-11 | 18 |
immature T cell | 6.73e-11 | 18 |
mature T cell | 6.73e-11 | 18 |
immature alpha-beta T cell | 6.73e-11 | 18 |
single nucleate cell | 7.92e-11 | 3 |
mononuclear cell | 7.92e-11 | 3 |
blood cell | 1.00e-10 | 11 |
leukocyte | 3.23e-08 | 136 |
CD8-positive, alpha-beta T cell | 1.26e-07 | 11 |
T cell | 1.89e-07 | 25 |
pro-T cell | 1.89e-07 | 25 |
lymphoid lineage restricted progenitor cell | 5.94e-07 | 52 |
lymphocyte | 8.96e-07 | 53 |
common lymphoid progenitor | 8.96e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
atrioventricular valve | 8.59e-08 | 2 |
pineal body | 1.12e-07 | 2 |
regional part of epithalamus | 1.12e-07 | 2 |
secretory circumventricular organ | 1.12e-07 | 2 |
circumventricular organ | 1.12e-07 | 2 |
epithalamus | 1.12e-07 | 2 |