FFCP PHASE1:Hg19::chr11:506325..506344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6050 | |EntrezGene=6050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10074 | |HGNC=10074 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000531540_5end | |association_with_transcript=0bp_to_ENST00000531540_5end | ||
|cluster_id=chr11:506325..506344,- | |||
|description=CAGE_peak_11_at_RNH1_5end | |description=CAGE_peak_11_at_RNH1_5end | ||
|id=chr11:506325..506344,- | |id=chr11:506325..506344,- | ||
|ontology_enrichment_celltype=CL:0002057!5.89e-26!42;CL:0000860!1.19e-24!45;CL:0000738!1.67e-24!140;CL:0000988!1.44e-23!182;CL:0000037!1.52e-23!172;CL:0000566!1.52e-23!172;CL:0002032!1.18e-22!165;CL:0000837!1.18e-22!165;CL:0000763!1.16e-21!112;CL:0000049!1.16e-21!112;CL:0000766!6.41e-21!76;CL:0000557!9.36e-21!71;CL:0002009!1.20e-19!65;CL:0002087!1.67e-19!119;CL:0002031!3.60e-19!124;CL:0000839!1.06e-18!70;CL:0002194!4.57e-18!63;CL:0000576!4.57e-18!63;CL:0000040!4.57e-18!63;CL:0000559!4.57e-18!63;CL:0002393!7.28e-10!9;CL:0002397!7.28e-10!9;CL:0000080!1.19e-07!6 | |ontology_enrichment_celltype=CL:0002057!5.89e-26!42;CL:0000860!1.19e-24!45;CL:0000738!1.67e-24!140;CL:0000988!1.44e-23!182;CL:0000037!1.52e-23!172;CL:0000566!1.52e-23!172;CL:0002032!1.18e-22!165;CL:0000837!1.18e-22!165;CL:0000763!1.16e-21!112;CL:0000049!1.16e-21!112;CL:0000766!6.41e-21!76;CL:0000557!9.36e-21!71;CL:0002009!1.20e-19!65;CL:0002087!1.67e-19!119;CL:0002031!3.60e-19!124;CL:0000839!1.06e-18!70;CL:0002194!4.57e-18!63;CL:0000576!4.57e-18!63;CL:0000040!4.57e-18!63;CL:0000559!4.57e-18!63;CL:0002393!7.28e-10!9;CL:0002397!7.28e-10!9;CL:0000080!1.19e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002393;1.22e-43;6!CL:0002397;1.22e-43;6!CL:0000875;4.10e-32;3!CL:0002396;4.10e-32;3!CL:0000576;2.86e-25;48!CL:0000766;1.45e-18;69!CL:0000860;1.94e-11;33!CL:0002057;1.94e-11;33!CL:0002087;3.91e-08;104!CL:0000473;7.93e-08;39!CL:0000234;7.93e-08;39!CL:0000763;7.70e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.78e-73,9;CL:0002397,3.78e-73,9;CL:0000860,9.61e-47,42;CL:0002057,9.61e-47,42;CL:0000473,1.14e-40,48;CL:0000234,1.14e-40,48;CL:0002009,7.01e-36,61;CL:0000557,1.55e-32,67;CL:0002194,3.72e-32,59;CL:0000576,3.72e-32,59;CL:0000040,3.72e-32,59;CL:0000559,3.72e-32,59;CL:0000875,4.11e-32,3;CL:0002396,4.11e-32,3;CL:0000839,1.35e-28,66;CL:0000766,4.39e-26,72;CL:0002087,8.55e-21,115;CL:0002031,6.39e-20,120;CL:0000738,9.61e-20,136;CL:0000763,1.64e-19,108;CL:0000049,1.64e-19,108;CL:0000037,1.47e-15,168;CL:0000988,1.19e-14,177;CL:0002032,2.66e-14,161;CL:0000837,2.66e-14,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-35;42!CL:0000049;2.59e-07;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.45e-20!102;UBERON:0003061!7.45e-20!102;UBERON:0002371!9.68e-19!80;UBERON:0002193!3.52e-17!112;UBERON:0001474!2.21e-16!86;UBERON:0002405!8.04e-13!115;UBERON:0004765!7.88e-12!101;UBERON:0001434!7.88e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-28,76;UBERON:0001474,2.77e-26,82;UBERON:0002390,7.95e-25,98;UBERON:0003061,7.95e-25,98;UBERON:0004765,8.64e-24,90;UBERON:0002405,5.79e-23,93;UBERON:0002193,2.40e-22,108;UBERON:0001434,3.17e-21,100;UBERON:0002204,6.95e-12,167;UBERON:0003081,7.28e-11,203;UBERON:0000926,2.50e-08,315;UBERON:0004120,2.50e-08,315;UBERON:0006603,2.50e-08,315 | |||
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|short_description=p11@RNH1 | |short_description=p11@RNH1 | ||
}} | }} |
Latest revision as of 07:05, 18 September 2015
Short description: | p11@RNH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RNH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531540_5end |
EntrezGene: | RNH1 |
HGNC: | 10074 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.78e-73 | 9 |
CD14-positive, CD16-positive monocyte | 3.78e-73 | 9 |
classical monocyte | 9.61e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.61e-47 | 42 |
defensive cell | 1.14e-40 | 48 |
phagocyte | 1.14e-40 | 48 |
macrophage dendritic cell progenitor | 7.01e-36 | 61 |
granulocyte monocyte progenitor cell | 1.55e-32 | 67 |
monopoietic cell | 3.72e-32 | 59 |
monocyte | 3.72e-32 | 59 |
monoblast | 3.72e-32 | 59 |
promonocyte | 3.72e-32 | 59 |
non-classical monocyte | 4.11e-32 | 3 |
CD14-low, CD16-positive monocyte | 4.11e-32 | 3 |
myeloid lineage restricted progenitor cell | 1.35e-28 | 66 |
myeloid leukocyte | 4.39e-26 | 72 |
nongranular leukocyte | 8.55e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 6.39e-20 | 120 |
leukocyte | 9.61e-20 | 136 |
myeloid cell | 1.64e-19 | 108 |
common myeloid progenitor | 1.64e-19 | 108 |
hematopoietic stem cell | 1.47e-15 | 168 |
hematopoietic cell | 1.19e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.66e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.66e-14 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-28 | 76 |
bone element | 2.77e-26 | 82 |
hematopoietic system | 7.95e-25 | 98 |
blood island | 7.95e-25 | 98 |
skeletal element | 8.64e-24 | 90 |
immune system | 5.79e-23 | 93 |
hemolymphoid system | 2.40e-22 | 108 |
skeletal system | 3.17e-21 | 100 |
musculoskeletal system | 6.95e-12 | 167 |
lateral plate mesoderm | 7.28e-11 | 203 |
mesoderm | 2.50e-08 | 315 |
mesoderm-derived structure | 2.50e-08 | 315 |
presumptive mesoderm | 2.50e-08 | 315 |