FFCP PHASE1:Hg19::chr11:506325..506344,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10074 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000531540_5end | |||
|cluster_id=chr11:506325..506344,- | |||
|description=CAGE_peak_11_at_RNH1_5end | |||
|id=chr11:506325..506344,- | |||
|ontology_enrichment_celltype=CL:0002057!5.89e-26!42;CL:0000860!1.19e-24!45;CL:0000738!1.67e-24!140;CL:0000988!1.44e-23!182;CL:0000037!1.52e-23!172;CL:0000566!1.52e-23!172;CL:0002032!1.18e-22!165;CL:0000837!1.18e-22!165;CL:0000763!1.16e-21!112;CL:0000049!1.16e-21!112;CL:0000766!6.41e-21!76;CL:0000557!9.36e-21!71;CL:0002009!1.20e-19!65;CL:0002087!1.67e-19!119;CL:0002031!3.60e-19!124;CL:0000839!1.06e-18!70;CL:0002194!4.57e-18!63;CL:0000576!4.57e-18!63;CL:0000040!4.57e-18!63;CL:0000559!4.57e-18!63;CL:0002393!7.28e-10!9;CL:0002397!7.28e-10!9;CL:0000080!1.19e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.22e-43;6!CL:0002397;1.22e-43;6!CL:0000875;4.10e-32;3!CL:0002396;4.10e-32;3!CL:0000576;2.86e-25;48!CL:0000766;1.45e-18;69!CL:0000860;1.94e-11;33!CL:0002057;1.94e-11;33!CL:0002087;3.91e-08;104!CL:0000473;7.93e-08;39!CL:0000234;7.93e-08;39!CL:0000763;7.70e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.78e-73,9;CL:0002397,3.78e-73,9;CL:0000860,9.61e-47,42;CL:0002057,9.61e-47,42;CL:0000473,1.14e-40,48;CL:0000234,1.14e-40,48;CL:0002009,7.01e-36,61;CL:0000557,1.55e-32,67;CL:0002194,3.72e-32,59;CL:0000576,3.72e-32,59;CL:0000040,3.72e-32,59;CL:0000559,3.72e-32,59;CL:0000875,4.11e-32,3;CL:0002396,4.11e-32,3;CL:0000839,1.35e-28,66;CL:0000766,4.39e-26,72;CL:0002087,8.55e-21,115;CL:0002031,6.39e-20,120;CL:0000738,9.61e-20,136;CL:0000763,1.64e-19,108;CL:0000049,1.64e-19,108;CL:0000037,1.47e-15,168;CL:0000988,1.19e-14,177;CL:0002032,2.66e-14,161;CL:0000837,2.66e-14,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-35;42!CL:0000049;2.59e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.45e-20!102;UBERON:0003061!7.45e-20!102;UBERON:0002371!9.68e-19!80;UBERON:0002193!3.52e-17!112;UBERON:0001474!2.21e-16!86;UBERON:0002405!8.04e-13!115;UBERON:0004765!7.88e-12!101;UBERON:0001434!7.88e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.71e-28,76;UBERON:0001474,2.77e-26,82;UBERON:0002390,7.95e-25,98;UBERON:0003061,7.95e-25,98;UBERON:0004765,8.64e-24,90;UBERON:0002405,5.79e-23,93;UBERON:0002193,2.40e-22,108;UBERON:0001434,3.17e-21,100;UBERON:0002204,6.95e-12,167;UBERON:0003081,7.28e-11,203;UBERON:0000926,2.50e-08,315;UBERON:0004120,2.50e-08,315;UBERON:0006603,2.50e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.246301768349837,0.393553906568396,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.00272223735071,1.30206522429511,0,0,0,0.290796477559129,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0,1.5369642391746,0.236482229888585,0,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0,1.39624560335142,0.426224750532694,0.290209238628584,0,0.622822248995575,0.502497330513487,0.521482918420201,1.73751075764093,1.81619850790011,0.736555271975129,0.316462387440884,1.26753171787165,5.31510749912609,2.30624510059213,3.14520167210186,1.35159203557356,0.64290234678832,4.56020389985998,1.59133341759272,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0.786839080455332,0,0.205601498999509,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0,0,0.384273959177026,0.910415432919148,0.164437904603676,0,0,0.296573126324121,0,0,0.339928028092699,0,0.34362744548263,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.589405839739707,0,0,0.97364218096405,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0,0,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0.829312462163088,0.864719720501769,0.6312121671319,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0.37428108081644,0,0,1.11443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0.296521128680622,0.494255755786011,0.730953646538188,0,0,0,0,0,0.242780379534093,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0,0.343972064943233,0,0,0.0821154570532092,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0.114536596165916,0,0.14405479798815,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0,0.0846733320657845,0.795229689809303,0,0,0.137539436597234,0,0.2249738915515,2.32140586367385,0,0,0,0,0.211200673038813,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0.506827321959218,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0.327609848846413,0,0.211312123358627,0.19998739585493,0.106691729694141,0.172214979660816,0,0.184105950251841,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0.0981477185010256,0.235939446695481,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.255524855279191,0,0,0,0,0,0.115233987555779,0,0.135939465953663,0.0657727735628491,0,0,0,0,0,0,0,0.9555033757741,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0.473328002922261,0.255640214277473,0,0,0,0,0.223710863595585,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.299823467774787,0,0.352894871715692,0.0802413666891683,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,2.19758224832894,3.7514978221865,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0.179650404213174,0,0,0,0,0,0.320568492303233 | |||
|short_description=p11@RNH1 | |||
}} |
Latest revision as of 07:05, 18 September 2015
Short description: | p11@RNH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_RNH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000531540_5end |
EntrezGene: | RNH1 |
HGNC: | 10074 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.78e-73 | 9 |
CD14-positive, CD16-positive monocyte | 3.78e-73 | 9 |
classical monocyte | 9.61e-47 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.61e-47 | 42 |
defensive cell | 1.14e-40 | 48 |
phagocyte | 1.14e-40 | 48 |
macrophage dendritic cell progenitor | 7.01e-36 | 61 |
granulocyte monocyte progenitor cell | 1.55e-32 | 67 |
monopoietic cell | 3.72e-32 | 59 |
monocyte | 3.72e-32 | 59 |
monoblast | 3.72e-32 | 59 |
promonocyte | 3.72e-32 | 59 |
non-classical monocyte | 4.11e-32 | 3 |
CD14-low, CD16-positive monocyte | 4.11e-32 | 3 |
myeloid lineage restricted progenitor cell | 1.35e-28 | 66 |
myeloid leukocyte | 4.39e-26 | 72 |
nongranular leukocyte | 8.55e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 6.39e-20 | 120 |
leukocyte | 9.61e-20 | 136 |
myeloid cell | 1.64e-19 | 108 |
common myeloid progenitor | 1.64e-19 | 108 |
hematopoietic stem cell | 1.47e-15 | 168 |
hematopoietic cell | 1.19e-14 | 177 |
hematopoietic oligopotent progenitor cell | 2.66e-14 | 161 |
hematopoietic multipotent progenitor cell | 2.66e-14 | 161 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.71e-28 | 76 |
bone element | 2.77e-26 | 82 |
hematopoietic system | 7.95e-25 | 98 |
blood island | 7.95e-25 | 98 |
skeletal element | 8.64e-24 | 90 |
immune system | 5.79e-23 | 93 |
hemolymphoid system | 2.40e-22 | 108 |
skeletal system | 3.17e-21 | 100 |
musculoskeletal system | 6.95e-12 | 167 |
lateral plate mesoderm | 7.28e-11 | 203 |
mesoderm | 2.50e-08 | 315 |
mesoderm-derived structure | 2.50e-08 | 315 |
presumptive mesoderm | 2.50e-08 | 315 |