FFCP PHASE1:Hg19::chr4:69215679..69215688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91746 | |EntrezGene=91746 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30626 | |HGNC=30626 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=74bp_to_ENST00000510746_5end | |association_with_transcript=74bp_to_ENST00000510746_5end | ||
|cluster_id=chr4:69215679..69215688,- | |||
|description=CAGE_peak_3_at_YTHDC1_5end | |description=CAGE_peak_3_at_YTHDC1_5end | ||
|id=chr4:69215679..69215688,- | |id=chr4:69215679..69215688,- | ||
|ontology_enrichment_celltype=CL:0002057!9.26e-18!42;CL:0000860!4.88e-17!45;CL:0000766!5.01e-17!76;CL:0000763!4.61e-15!112;CL:0000049!4.61e-15!112;CL:0000557!1.25e-14!71;CL:0002009!9.28e-14!65;CL:0002194!4.91e-13!63;CL:0000576!4.91e-13!63;CL:0000040!4.91e-13!63;CL:0000559!4.91e-13!63;CL:0000839!4.07e-12!70;CL:0000037!6.61e-10!172;CL:0000566!6.61e-10!172;CL:0000738!7.41e-10!140;CL:0002032!6.36e-09!165;CL:0000837!6.36e-09!165;CL:0000988!2.43e-08!182 | |ontology_enrichment_celltype=CL:0002057!9.26e-18!42;CL:0000860!4.88e-17!45;CL:0000766!5.01e-17!76;CL:0000763!4.61e-15!112;CL:0000049!4.61e-15!112;CL:0000557!1.25e-14!71;CL:0002009!9.28e-14!65;CL:0002194!4.91e-13!63;CL:0000576!4.91e-13!63;CL:0000040!4.91e-13!63;CL:0000559!4.91e-13!63;CL:0000839!4.07e-12!70;CL:0000037!6.61e-10!172;CL:0000566!6.61e-10!172;CL:0000738!7.41e-10!140;CL:0002032!6.36e-09!165;CL:0000837!6.36e-09!165;CL:0000988!2.43e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.58e-21;33!CL:0002057;9.58e-21;33!CL:0000473;8.17e-14;39!CL:0000234;8.17e-14;39!CL:0000576;1.81e-12;48!CL:0000766;5.23e-09;69!CL:0000094;5.54e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.56e-22,42;CL:0002057,3.56e-22,42;CL:0000766,5.40e-20,72;CL:0000473,5.49e-18,48;CL:0000234,5.49e-18,48;CL:0000557,7.16e-17,67;CL:0002009,3.29e-16,61;CL:0000763,4.14e-16,108;CL:0000049,4.14e-16,108;CL:0002194,2.93e-15,59;CL:0000576,2.93e-15,59;CL:0000040,2.93e-15,59;CL:0000559,2.93e-15,59;CL:0000839,3.04e-14,66;CL:0000738,6.08e-12,136;CL:0000037,1.86e-11,168;CL:0002032,3.38e-10,161;CL:0000837,3.38e-10,161;CL:0000988,4.46e-10,177;CL:0002031,3.59e-08,120;CL:0002087,3.88e-08,115;CL:0000094,4.87e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.01e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.96e-12!80;UBERON:0001474!1.21e-09!86;UBERON:0004765!1.01e-08!101;UBERON:0001434!1.01e-08!101;UBERON:0002193!1.48e-08!112;UBERON:0002390!2.60e-08!102;UBERON:0003061!2.60e-08!102;UBERON:0002405!2.72e-08!115 | |ontology_enrichment_uberon=UBERON:0002371!3.96e-12!80;UBERON:0001474!1.21e-09!86;UBERON:0004765!1.01e-08!101;UBERON:0001434!1.01e-08!101;UBERON:0002193!1.48e-08!112;UBERON:0002390!2.60e-08!102;UBERON:0003061!2.60e-08!102;UBERON:0002405!2.72e-08!115 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-14,76;UBERON:0002405,6.28e-12,93;UBERON:0001474,9.21e-12,82;UBERON:0004765,3.79e-11,90;UBERON:0002193,2.49e-10,108;UBERON:0002390,2.87e-10,98;UBERON:0003061,2.87e-10,98;UBERON:0001434,6.39e-09,100 | |||
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| ||
|short_description=p3@YTHDC1 | |short_description=p3@YTHDC1 | ||
}} | }} |
Latest revision as of 07:45, 18 September 2015
Short description: | p3@YTHDC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_YTHDC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_ENST00000510746_5end |
EntrezGene: | YTHDC1 |
HGNC: | 30626 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.56e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.56e-22 | 42 |
myeloid leukocyte | 5.40e-20 | 72 |
defensive cell | 5.49e-18 | 48 |
phagocyte | 5.49e-18 | 48 |
granulocyte monocyte progenitor cell | 7.16e-17 | 67 |
macrophage dendritic cell progenitor | 3.29e-16 | 61 |
myeloid cell | 4.14e-16 | 108 |
common myeloid progenitor | 4.14e-16 | 108 |
monopoietic cell | 2.93e-15 | 59 |
monocyte | 2.93e-15 | 59 |
monoblast | 2.93e-15 | 59 |
promonocyte | 2.93e-15 | 59 |
myeloid lineage restricted progenitor cell | 3.04e-14 | 66 |
leukocyte | 6.08e-12 | 136 |
hematopoietic stem cell | 1.86e-11 | 168 |
hematopoietic oligopotent progenitor cell | 3.38e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.38e-10 | 161 |
hematopoietic cell | 4.46e-10 | 177 |
hematopoietic lineage restricted progenitor cell | 3.59e-08 | 120 |
nongranular leukocyte | 3.88e-08 | 115 |
granulocyte | 4.87e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-14 | 76 |
immune system | 6.28e-12 | 93 |
bone element | 9.21e-12 | 82 |
skeletal element | 3.79e-11 | 90 |
hemolymphoid system | 2.49e-10 | 108 |
hematopoietic system | 2.87e-10 | 98 |
blood island | 2.87e-10 | 98 |
skeletal system | 6.39e-09 | 100 |