FFCP PHASE1:Hg19::chr9:95709798..95709811,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:95709798..95709811,+ to FFCP PHASE1:Hg19::chr9:95709798..95709811,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89846 | |EntrezGene=89846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16027 | |HGNC=16027 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSP0 | |UniProt=Q5JSP0 | ||
|association_with_transcript=65bp_to_ENST00000375482_5end | |||
|cluster_id=chr9:95709798..95709811,+ | |||
|description=CAGE_peak_3_at_FGD3_5end | |||
|id=chr9:95709798..95709811,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.55e-16!18;CL:0000789!3.55e-16!18;CL:0002420!3.55e-16!18;CL:0002419!3.55e-16!18;CL:0000790!3.55e-16!18;CL:0000625!8.93e-12!11;CL:0000084!1.23e-09!25;CL:0000827!1.23e-09!25;CL:0000624!2.04e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.41e-34;18!CL:0000789;4.41e-34;18!CL:0002419;4.41e-34;18!CL:0000625;1.05e-23;11!CL:0000084;4.62e-23;25!CL:0000624;2.63e-14;6!CL:0000244;1.82e-08;4!CL:0000731;1.82e-08;4!CL:0000898;2.96e-08;3!CL:0000226;2.33e-07;3!CL:0000842;2.33e-07;3!CL:0000623;4.65e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.02e-34,18;CL:0000789,4.02e-34,18;CL:0002420,4.02e-34,18;CL:0002419,4.02e-34,18;CL:0000790,4.02e-34,18;CL:0000625,9.21e-24,11;CL:0000084,4.33e-23,25;CL:0000827,4.33e-23,25;CL:0000624,2.73e-14,6;CL:0000838,2.23e-12,52;CL:0000542,4.88e-12,53;CL:0000051,4.88e-12,53;CL:0000244,1.92e-08,4;CL:0000731,1.92e-08,4;CL:0000898,2.96e-08,3;CL:0000226,2.12e-07,3;CL:0000842,2.12e-07,3;CL:0002087,2.74e-07,115;CL:0000623,4.96e-07,3;CL:0000825,4.96e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.41e-34;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.23e-19!115;UBERON:0001049!8.78e-10!57;UBERON:0005068!8.78e-10!57;UBERON:0006241!8.78e-10!57;UBERON:0007135!8.78e-10!57;UBERON:0001893!1.30e-09!34;UBERON:0002020!1.75e-09!34;UBERON:0003528!1.75e-09!34;UBERON:0002791!2.64e-09!33;UBERON:0001869!8.23e-09!32;UBERON:0000956!5.02e-08!25;UBERON:0000203!5.02e-08!25;UBERON:0003080!5.49e-08!42;UBERON:0001017!9.15e-08!82;UBERON:0002780!1.94e-07!41;UBERON:0001890!1.94e-07!41;UBERON:0006240!1.94e-07!41;UBERON:0005743!2.53e-07!86;UBERON:0001950!4.88e-07!20;UBERON:0000178!4.90e-07!15;UBERON:0000179!4.90e-07!15;UBERON:0000463!4.90e-07!15;UBERON:0002619!6.07e-07!22;UBERON:0002616!6.20e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-15;15!UBERON:0000179;1.50e-15;15!UBERON:0000463;1.50e-15;15!UBERON:0000365;6.01e-10;5!UBERON:0005910;3.17e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.48e-15,15;UBERON:0000179,1.48e-15,15;UBERON:0000463,1.48e-15,15;UBERON:0000365,5.29e-10,5;UBERON:0005910,2.86e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,1.14494394852423,0.273748850145768,0.125542639594803,0,0,0,0.786728553697808,1.15148819429164,0.619264493264304,0,0.6024118375565,1.10926203050036,0,0,0,1.10799081706375,1.00272223735071,2.82114131930607,0.447830948479849,1.94336199611388,0.257575567634187,0.290796477559129,0,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0,0,1.68152568894461,0,7.27826149421182,9.03924754323079,12.7472929379696,2.84217042164153,25.7478590640536,18.9379122293893,19.4826728407911,3.45372416344038,16.4979308185909,12.6274319912664,13.2693893244858,3.84273959177025,3.25148368899696,1.97325485524411,1.38175008892924,2.89803085735052,24.7638560480641,26.7540828089713,14.6349733326968,3.05935225283429,17.6281427056884,11.6833331464094,6.32549230048757,11.1497895013434,13.0216690771284,8.55406840003537,15.3586621459328,13.4385941712139,11.2437653897111,9.94464458584871,5.74789597844733,9.47551693156242,5.88368430723716,3.91025890483557,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,2.5500670180478,1.11235332835329,0.324547393654683,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.272746120590835,0,0.365921118388786,0,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.71389204585589,4.31255149719035,2.31017465303547,0,1.30139853857622,2.31986643833309,5.36052049069916,2.55175500661265,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.44364894042395,4.52999821719095,5.97674323699288,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,1.37354197227515,1.32015199872941,0,0.650060246036521,0,0.386682873168488,0,0,0.137836572484531,0,0,0,1.60257664164127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.192444225451024,0,0,0.0941438007767792,2.15252686335615,1.68471475667626,8.86860307073351,2.06751060186264,4.05958087385735,4.58782324285425,3.41788312304498,7.86164859010704,5.34770955012053,3.24236655596359,4.32025149790492,7.9312517629427,0,0,2.20536194382929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.984685914873589,0,0,0.211125408127993,0.19924798825107,1.93398740871803,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0.185536196323703,11.9768278800717,0.7812832832557,0,2.89999830173917,0.227586896570999,0.508507300585533,0,0,0,0,1.77148277162768,0,1.52581736317083,0,0.295547618953547,0,0,0.41827123283581,0.461701551022782,0,0,0.359030577639089,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,1.99052386215701,0,0.611030144933625,0,0,0,0.471807930864739,2.40773294189637,0,0,0.782658475728359,0.242780379534093,0,0,14.385419796633,0.126373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.174118413160805,0,0,0,0,0,0.678923115418936,0,0.225980740780532,0,0,0.316553979779393,1.36885967914362,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.199679000498991,0.858452096273142,0.223171457441873,0.53746777989381,0,0,0,0,0,0.0984274815147488,0,0,0.544813624446302,0.482259445395058,0,0,0,0,0.607495566580247,0,0.157611414598396,0.524545881349981,0,0,0.767660789277781,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,2.11444506695002,0.533937062838473,1.10043013569766,0,0,0,0,0.638341257770182,0,0,0,0.327872630709804,0.157054096250234,0.886068179966986,0.488105059607853,0.1251909307065,0,0.110929051536852,0.745156835296601,0,0,0,0,0,0.936669811613763,5.50699908721136,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.319267718114302,0.205116364240755,12.3515131148642,0.622415272177961,0,0,0.88332946650923,0.707818340086442,0.366857197043358,0.346576998451015,0,0,5.17182177502314,0,0,0.781514011233092,0,0,0.443568258651136,0.270150338473579,0,0.413373593002368,0.380494861163441,15.3152946525101,0,0.496211178389294,0,1.40538670403555,0,0,0,0,0,0,0.171488009437418,0.2039091989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| ||
|short_description=p3@FGD3 | |||
}} | }} |
Latest revision as of 07:54, 18 September 2015
Short description: | p3@FGD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 65bp_to_ENST00000375482_5end |
EntrezGene: | FGD3 |
HGNC: | 16027 |
UniProt: | Q5JSP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.02e-34 | 18 |
alpha-beta T cell | 4.02e-34 | 18 |
immature T cell | 4.02e-34 | 18 |
mature T cell | 4.02e-34 | 18 |
immature alpha-beta T cell | 4.02e-34 | 18 |
CD8-positive, alpha-beta T cell | 9.21e-24 | 11 |
T cell | 4.33e-23 | 25 |
pro-T cell | 4.33e-23 | 25 |
CD4-positive, alpha-beta T cell | 2.73e-14 | 6 |
lymphoid lineage restricted progenitor cell | 2.23e-12 | 52 |
lymphocyte | 4.88e-12 | 53 |
common lymphoid progenitor | 4.88e-12 | 53 |
transitional epithelial cell | 1.92e-08 | 4 |
urothelial cell | 1.92e-08 | 4 |
naive T cell | 2.96e-08 | 3 |
single nucleate cell | 2.12e-07 | 3 |
mononuclear cell | 2.12e-07 | 3 |
nongranular leukocyte | 2.74e-07 | 115 |
natural killer cell | 4.96e-07 | 3 |
pro-NK cell | 4.96e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.48e-15 | 15 |
haemolymphatic fluid | 1.48e-15 | 15 |
organism substance | 1.48e-15 | 15 |
urothelium | 5.29e-10 | 5 |
transitional epithelium | 2.86e-08 | 6 |