FFCP PHASE1:Hg19::chr2:73340190..73340229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26056 | |EntrezGene=26056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24845 | |HGNC=24845 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BXF6,Q9UFM0 | |UniProt=Q9BXF6,Q9UFM0 | ||
|association_with_transcript=-44bp_to_ENST00000258098,NM_015470,uc002siu.3_5end | |association_with_transcript=-44bp_to_ENST00000258098,NM_015470,uc002siu.3_5end | ||
|cluster_id=chr2:73340190..73340229,- | |||
|description=CAGE_peak_3_at_RAB11FIP5_5end | |description=CAGE_peak_3_at_RAB11FIP5_5end | ||
|id=chr2:73340190..73340229,- | |id=chr2:73340190..73340229,- | ||
|ontology_enrichment_celltype=CL:0000222!9.23e-17!119;CL:0000055!1.07e-13!180;CL:0002139!1.33e-12!24;CL:0000213!8.00e-12!57;CL:0000215!8.00e-12!57;CL:0000115!3.82e-11!35;CL:0002078!1.68e-10!44;CL:0000071!6.89e-10!18;CL:0002546!6.89e-10!18;CL:0000220!3.29e-08!246;CL:0002321!6.91e-08!248;CL:0000057!1.13e-07!75;CL:0000183!4.83e-07!59;CL:0000076!5.53e-07!62 | |ontology_enrichment_celltype=CL:0000222!9.23e-17!119;CL:0000055!1.07e-13!180;CL:0002139!1.33e-12!24;CL:0000213!8.00e-12!57;CL:0000215!8.00e-12!57;CL:0000115!3.82e-11!35;CL:0002078!1.68e-10!44;CL:0000071!6.89e-10!18;CL:0002546!6.89e-10!18;CL:0000220!3.29e-08!246;CL:0002321!6.91e-08!248;CL:0000057!1.13e-07!75;CL:0000183!4.83e-07!59;CL:0000076!5.53e-07!62 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.74e-14;24!CL:0000115;2.10e-11;36!CL:0000071;3.01e-11;18!CL:0002078;4.85e-08;45!CL:0000213;1.10e-07;58!CL:0000215;1.10e-07;58 | |ontology_enrichment_celltype_v019=CL:0002139;1.74e-14;24!CL:0000115;2.10e-11;36!CL:0000071;3.01e-11;18!CL:0002078;4.85e-08;45!CL:0000213;1.10e-07;58!CL:0000215;1.10e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.85e-16,121;CL:0002139,5.58e-14,24;CL:0000115,7.12e-13,36;CL:0000213,1.49e-12,58;CL:0000215,1.49e-12,58;CL:0002078,2.38e-11,45;CL:0000071,6.31e-11,18;CL:0002546,6.31e-11,18;CL:0000057,8.60e-08,76;CL:0000076,9.70e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;3.01e-11;18 | |ontology_enrichment_development_v019=CL:0002546;3.01e-11;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.07e-16!312;UBERON:0004111!7.22e-16!241;UBERON:0000483!1.10e-15!309;UBERON:0004872!1.40e-15!84;UBERON:0000025!3.36e-15!194;UBERON:0000055!5.68e-15!69;UBERON:0000477!2.09e-14!286;UBERON:0002049!4.17e-14!79;UBERON:0007798!4.17e-14!79;UBERON:0001981!1.72e-13!60;UBERON:0007500!1.72e-13!60;UBERON:0004537!1.72e-13!60;UBERON:0006965!1.72e-13!60;UBERON:0000475!2.31e-13!365;UBERON:0003914!2.34e-12!118;UBERON:0001009!6.59e-11!113;UBERON:0004535!3.84e-10!110;UBERON:0001986!6.89e-10!18;UBERON:0004638!6.89e-10!18;UBERON:0004852!6.89e-10!18;UBERON:0006914!1.27e-09!25;UBERON:0001637!1.45e-09!42;UBERON:0003509!1.45e-09!42;UBERON:0004572!1.45e-09!42;UBERON:0000481!1.68e-09!347;UBERON:0000487!1.84e-09!22;UBERON:0000490!2.47e-07!138;UBERON:0000486!3.31e-07!82;UBERON:0000914!3.59e-07!83;UBERON:0002329!3.59e-07!83;UBERON:0003077!3.59e-07!83;UBERON:0003059!3.59e-07!83;UBERON:0007282!3.59e-07!83;UBERON:0009618!3.59e-07!83;UBERON:0007285!3.59e-07!83;UBERON:0004573!3.71e-07!33;UBERON:0004571!3.71e-07!33;UBERON:0000468!3.91e-07!659;UBERON:0000467!8.95e-07!625 | |ontology_enrichment_uberon=UBERON:0000119!2.07e-16!312;UBERON:0004111!7.22e-16!241;UBERON:0000483!1.10e-15!309;UBERON:0004872!1.40e-15!84;UBERON:0000025!3.36e-15!194;UBERON:0000055!5.68e-15!69;UBERON:0000477!2.09e-14!286;UBERON:0002049!4.17e-14!79;UBERON:0007798!4.17e-14!79;UBERON:0001981!1.72e-13!60;UBERON:0007500!1.72e-13!60;UBERON:0004537!1.72e-13!60;UBERON:0006965!1.72e-13!60;UBERON:0000475!2.31e-13!365;UBERON:0003914!2.34e-12!118;UBERON:0001009!6.59e-11!113;UBERON:0004535!3.84e-10!110;UBERON:0001986!6.89e-10!18;UBERON:0004638!6.89e-10!18;UBERON:0004852!6.89e-10!18;UBERON:0006914!1.27e-09!25;UBERON:0001637!1.45e-09!42;UBERON:0003509!1.45e-09!42;UBERON:0004572!1.45e-09!42;UBERON:0000481!1.68e-09!347;UBERON:0000487!1.84e-09!22;UBERON:0000490!2.47e-07!138;UBERON:0000486!3.31e-07!82;UBERON:0000914!3.59e-07!83;UBERON:0002329!3.59e-07!83;UBERON:0003077!3.59e-07!83;UBERON:0003059!3.59e-07!83;UBERON:0007282!3.59e-07!83;UBERON:0009618!3.59e-07!83;UBERON:0007285!3.59e-07!83;UBERON:0004573!3.71e-07!33;UBERON:0004571!3.71e-07!33;UBERON:0000468!3.91e-07!659;UBERON:0000467!8.95e-07!625 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.01e-11;18!UBERON:0001986;3.01e-11;18!UBERON:0004852;3.01e-11;18!UBERON:0000487;1.13e-10;22!UBERON:0006914;1.91e-10;25!UBERON:0000055;1.34e-09;65!UBERON:0007500;1.70e-09;56!UBERON:0001981;1.70e-09;56!UBERON:0004537;1.70e-09;56!UBERON:0001637;5.25e-08;42!UBERON:0003509;5.25e-08;42!UBERON:0004572;5.25e-08;42!UBERON:0003914;1.28e-07;74!UBERON:0002049;3.96e-07;75!UBERON:0007798;3.96e-07;75!UBERON:0004573;8.98e-07;33!UBERON:0004571;8.98e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0004638;3.01e-11;18!UBERON:0001986;3.01e-11;18!UBERON:0004852;3.01e-11;18!UBERON:0000487;1.13e-10;22!UBERON:0006914;1.91e-10;25!UBERON:0000055;1.34e-09;65!UBERON:0007500;1.70e-09;56!UBERON:0001981;1.70e-09;56!UBERON:0004537;1.70e-09;56!UBERON:0001637;5.25e-08;42!UBERON:0003509;5.25e-08;42!UBERON:0004572;5.25e-08;42!UBERON:0003914;1.28e-07;74!UBERON:0002049;3.96e-07;75!UBERON:0007798;3.96e-07;75!UBERON:0004573;8.98e-07;33!UBERON:0004571;8.98e-07;33 | ||
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| ||
|short_description=p3@RAB11FIP5 | |short_description=p3@RAB11FIP5 | ||
}} | }} |
Latest revision as of 09:12, 18 September 2015
Short description: | p3@RAB11FIP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAB11FIP5_5end |
Coexpression cluster: | NA |
Association with transcript: | -44bp_to_ENST00000258098, NM_015470, uc002siu.3_5end |
EntrezGene: | RAB11FIP5 |
HGNC: | 24845 |
UniProt: | Q9BXF6Q9UFM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.85e-16 | 121 |
endothelial cell of vascular tree | 5.58e-14 | 24 |
endothelial cell | 7.12e-13 | 36 |
lining cell | 1.49e-12 | 58 |
barrier cell | 1.49e-12 | 58 |
meso-epithelial cell | 2.38e-11 | 45 |
blood vessel endothelial cell | 6.31e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.31e-11 | 18 |
fibroblast | 8.60e-08 | 76 |
squamous epithelial cell | 9.70e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 5.03e-18 | 83 |
vessel | 3.12e-17 | 68 |
vasculature | 1.95e-15 | 78 |
vascular system | 1.95e-15 | 78 |
epithelial tube open at both ends | 4.66e-15 | 59 |
blood vessel | 4.66e-15 | 59 |
blood vasculature | 4.66e-15 | 59 |
vascular cord | 4.66e-15 | 59 |
tube | 6.32e-14 | 192 |
anatomical conduit | 1.35e-13 | 240 |
epithelial tube | 3.60e-13 | 117 |
circulatory system | 1.92e-12 | 112 |
cell layer | 5.17e-12 | 309 |
cardiovascular system | 1.44e-11 | 109 |
epithelium | 2.36e-11 | 306 |
blood vessel endothelium | 6.31e-11 | 18 |
endothelium | 6.31e-11 | 18 |
cardiovascular system endothelium | 6.31e-11 | 18 |
artery | 1.88e-10 | 42 |
arterial blood vessel | 1.88e-10 | 42 |
arterial system | 1.88e-10 | 42 |
simple squamous epithelium | 1.90e-10 | 22 |
squamous epithelium | 2.87e-10 | 25 |
systemic artery | 9.43e-08 | 33 |
systemic arterial system | 9.43e-08 | 33 |
epithelial vesicle | 2.27e-07 | 78 |
unilaminar epithelium | 9.94e-07 | 148 |